| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1489 |
|---|
| Symbol | |
|---|
| ID | 8415787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1780000 |
|---|
| End bp | 1780638 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645024457 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003181846 |
|---|
| Protein GI | 257791240 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAACG GCAACTACCA GGAGACGCAC GAGCGCATCT TGAAGAGCGG CCTTGCGGCG
TTTCTGGAAG AGGGGTTCGA GAAGGCGAAC CTGCGCAGGA TCTGCAAGGC TGCCGGCGTG
ACCACCGGGG CGTTCTACAA GCATTTCAAA GACAAGGAGG CGCTCTTCTC GGAGCTGGTC
GAGCCGCTGG CGAGCATGAT TCGCAAAGCT TACGCCCAAG GCGAGAAGCG AGGTTTCGCC
GGGTACGACG AAGGGAAGCC CGTGACCCCG GAGCAGGTGC GCGCCGCGCT CGAGGCCAAG
GCGGCGGGGA CGCTCGCGAC CACGGCGATG CTGTACTCCC ATCGCGACAT CTACGAGCTC
CTTGTGTTCC GCTCCTACGG CACCCCCTAC GAGCACTTCC TTGACTGGCT CGTCGACGAG
GAGGACAGGA CCACCCTCCG CGTTCTCGAG CTGATCCACG GCGCAGAGAA GGCTCGAACC
GTCATCTCGA AAGAGTCTCT CCACATCGTC AACCACGCGT TCTACAGCGC CCTTTCCGAG
AATATCATCC ACGCGAAGAG CGTCGAGGAG CTCAACGCGA CGACCGAGGT CATTTCAACG
TTCTTCAATG CGGGCTGGGA GAAATATCGC ACGCTTTGA
|
|---|
| Protein sequence | MSNGNYQETH ERILKSGLAA FLEEGFEKAN LRRICKAAGV TTGAFYKHFK DKEALFSELV
EPLASMIRKA YAQGEKRGFA GYDEGKPVTP EQVRAALEAK AAGTLATTAM LYSHRDIYEL
LVFRSYGTPY EHFLDWLVDE EDRTTLRVLE LIHGAEKART VISKESLHIV NHAFYSALSE
NIIHAKSVEE LNATTEVIST FFNAGWEKYR TL
|
|---|
| |