| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1335 |
|---|
| Symbol | |
|---|
| ID | 6068247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 1466182 |
|---|
| End bp | 1466841 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641600757 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001724328 |
|---|
| Protein GI | 170019374 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0586] Uncharacterized membrane-associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.64425 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGA TTTATTTCCT CATCGATTTT ATCCTGCACA TTGACGTGCA TCTGGCAGAG
CTGGTCGCGG AGTACGGCGT CTGGGTTTAT GCCATTTTGT TCTTAATTTT GTTCTGTGAA
ACCGGTCTGG TGGTAACGCC GTTTTTACCG GGTGATTCAT TGCTGTTTGT TGCCGGAGCG
TTGGCATCAC TGGAAACCAA CGATCTCAAC GTCCATATGA TGGTGGTGCT GATGCTGATC
GCCGCGATTG TGGGTGACGC GGTCAATTAC ACTATCGGGC GGTTGTTCGG TGAAAAGTTG
TTCAGTAATC CCAATTCGAA AATTTTCCGT CGCAGTTATC TCGACAAAAC CCATCAGTTT
TATGAGAAAC ATGGCGGCAA AACGATTATT CTCGCCCGTT TTGTGCCGAT CGTCAGAACG
TTCGCCCCGT TTGTTGCGGG AATGGGCCAC ATGTCGTACC GTCATTTCGC CGCTTATAAC
GTGATCGGCG CACTGTTGTG GGTACTGCTT TTTACCTACG CAGGCTATTT CTTCGGTACA
ATCCCGATGG TTCAGGATAA CCTTAAGCTG CTGATCGTCG GGATTATTGT GGTTTCTATT
TTGCCGGGCG TCATCGAAAT AATCCGTCAC AAACGCGCTG CGGCACGCGC CGCAAAATAA
|
|---|
| Protein sequence | MDLIYFLIDF ILHIDVHLAE LVAEYGVWVY AILFLILFCE TGLVVTPFLP GDSLLFVAGA
LASLETNDLN VHMMVVLMLI AAIVGDAVNY TIGRLFGEKL FSNPNSKIFR RSYLDKTHQF
YEKHGGKTII LARFVPIVRT FAPFVAGMGH MSYRHFAAYN VIGALLWVLL FTYAGYFFGT
IPMVQDNLKL LIVGIIVVSI LPGVIEIIRH KRAAARAAK
|
|---|
| |