| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0203 |
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| Symbol | |
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| ID | 6065313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 231128 |
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| End bp | 234241 |
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| Gene Length | 3114 bp |
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| Protein Length | 1037 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641599604 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001723211 |
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| Protein GI | 170018257 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.115131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAACT ATTTTATTGA TCGCCCGGTT TTTGCCTGGG TACTTGCCAT TATTATGATG
CTTGCAGGTG GTCTGGCGAT CATGAACTTA CCGGTTGCGC AGTATCCGCA GATTGCGCCA
CCGACCATTA CCGTCAGCGC TACCTATCCA GGTGCCGATG CGCAAACGGT AGAAGACTCG
GTCACTCAGG TGATTGAGCA AAATATGAAT GGGCTTGATG GCCTGATGTA CATGTCTTCA
ACCAGTGATG CGGCGGGCAA TGCCTCTATC ACTCTGACCT TCGAGACTGG GACATCTCCT
GATATCGCAC AGGTTCAAGT GCAAAATAAA CTGCAACTCG CTATGCCTTC ATTACCTGAA
GCAGTGCAGC AGCAGGGGAT TAGCGTCGAT AAGTCGAGCA GTAATATCCT GATGGTAGCG
GCGTTTATTT CTGATAACGG CAGCCTCAAC CAGTACGATA TCGCGGACTA TGTAGCGTCT
AATATCAAAG ACCCGCTAAG CCGTACCGCG GGCGTTGGTA GCGTACAACT CTTTGGTTCC
GAGTATGCCA TGCGTATCTG GCTGGACCCG CAAAAACTCA ATAAATATAA CCTGGTACCT
TCCGATGTTA TTTCCCAGAT TAAGGTGCAA AACAACCAGA TTTCCGGTGG TCAACTGGGT
GGCATGCCAC AGGCGGCAGA CCAGCAGCTA AACGCCTCGA TCATTGTGCA GACGCGTCTG
CAAACGCCGG AAGAATTTGG CAAAATCCTG TTGAAAGTTC AGCAAGATGG TTCGCAAGTG
CTGCTGCGTG ATGTCGCTCG CGTCGAACTT GGGGCGGAAG ATTATTCCAC CGTGGCGCGC
TATAACGGCA AACCTGCTGC CGGGATCGCC ATCAAACTGG CTGCCGGAGC AAACGCCCTG
GATACCTCGC GGGCAGTCAA AGAGGAACTG AACCGCTTAT CAGCCTATTT CCCGGCAAGT
CTGAAGACGG TTTATCCTTA CGACACCACG CCGTTTATCG AAATTTCTAT TCAGGAAGTT
TTCAAAACAC TGGTTGAGGC TATCATCCTA GTCTTCCTGG TCATGTATCT GTTTTTGCAG
AATTTCCGTG CCACAATCAT CCCGACGATT GCCGTACCGG TGGTTATTCT CGGGACGTTT
GCGATCTTGT CGGCGGTCGG TTTCACCATC AACACGTTGA CTATGTTCGG GATGGTGCTG
GCGATAGGGT TACTGGTGGA TGACGCCATC GTGGTGGTGG AGAACGTCGA GCGTGTCATT
GCGGAAGATA AGCTACCGCC GAAGGAAGCG ACGCATAAAT CGATGGGGCA GATCCAACGT
GCGCTGGTCG GTATTGCCGT TGTTCTTTCC GCAGTGTTTA TGCCGATGGC CTTTATGAGC
GGTGCAACCG GGGAGATCTA CCGCCAGTTC TCCATCACGC TGATCTCCTC CATGCTGCTT
TCAGTATTTG TGGCAATGAG CCTGACCCCT GCCCTGTGCG CCACCATTCT GAAAGCCGCG
CCGGAAGGCG GTCACAAACC TAACGCCCTG TTCGCACGCT TCAACACGCT GTTTGAAAAA
TCAACTCAAC ACTATACCGA TAGCACCCGC TCGCTGTTGC GTTGTACCGG TCGCTACATG
GTGGTCTACC TGCTGATTTG CGCCGGGATG GCGGTGCTGT TCCTGCGCAC GCCGACCTCT
TTCTTACCAG AAGAGGATCA GGGGGTATTT ATGACCACCG CGCAGTTACC TTCCGGTGCC
ACCATGGTTA ACACCACGAA AGTGCTGCAA CAGGTGACGG ATTATTATCT GACTAAAGAG
AAAGATAATG TCCAGTCGGT GTTTACCGTT GGCGGCTTTG GCTTCAGCGG TCAGGGGCAA
AACAACGGCC TGGCGTTTAT CAGTCTCAAG CCGTGGTCTG AACGTGTCGG TGAGGAAAAC
TCGGTTACCG CGATCATTCA GCGGGCAATG ATTGCGTTAA GCAGTATCAA TAAAGCCGTC
GTCTTCCCGT TCAACTTACC CGCGGTGGCT GAACTGGGTA CCGCGTCAGG TTTTGATATG
GAACTGCTGG ACAACGGTAA CCTGGGGCAC GAAAAACTAA CCCAGGCGCG AAACGAGCTG
TTATCACTGG CAGCGCAATC ACCGAATCAG GTCACCGGGG TACGCCCGAA CGGCCTGGAA
GATACGCCGA TGTTCAAAGT GAACGTCAAC GCTGCGAAAG CTGAAGCGAT GGGCGTGGCG
CTGTCTGATA TCAACCAGAC AATTTCCACC GCCTTCGGCA GCAGCTACGT GAACGACTTC
CTCAACCAGG GGCGGGTGAA AAAAGTGTAT GTCCAGGCAG GCACGCCGTT CCGTATGTTG
CCGGATAACA TCAACCAATG GTATGTACGC AACGCCTCTG GCACGATGGC ACCGCTTTCT
GCCTACTCGT CTACCGAATG GACCTATGGT TCACCGCGAC TGGAACGCTA CAACGGCATC
CCGTCAATGG AGATTTTAGG TGAAGCGGCG GCCGGGAAAA GTACCGGTGA CGCCATGAAA
TTTATGGCAG ACCTGGTCGC TAAACTTCCG GCAGGCGTCG GCTACTCATG GACCGGACTA
TCGTATCAGG AAGCGTTATC CTCAAATCAG GCTCCTGCGC TGTATGCGAT TTCACTGGTC
GTGGTGTTCC TCGCCCTCGC CGCACTCTAT GAGAGCTGGT CAATTCCGTT CTCGGTGATG
TTGGTTGTTC CGTTAGGCGT CGTTGGCGCA TTACTGGCCA CCGATCTGCG CGGCTTAAGT
AATGACGTCT ACTTCCAGGT TGGTTTGCTG ACCACCATCG GGCTTTCCGC CAAAAACGCC
ATCCTGATTG TCGAATTTGC CGTTGAGATG ATGCAGAAAG AAGGGAAAAC GCCGATAGAG
GCAATCATCG AAGCGGCGCG GATGCGTTTA CGCCCAATCC TGATGACCTC TCTGGCCTTT
ATTCTCGGCG TGCTGCCGCT GGTTATCAGT CATGGTGCCG GTTCTGGCGC GCAAAACGCG
GTAGGTACCG GCGTGATGGG CGGGATGTTT GCCGCAACAG TGCTGGCAAT TTACTTCGTT
CCGGTCTTTT TCGTTGTAGT GGAACATCTC TTTGCCCGCT TTAAAAAAGC GTAA
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| Protein sequence | MANYFIDRPV FAWVLAIIMM LAGGLAIMNL PVAQYPQIAP PTITVSATYP GADAQTVEDS
VTQVIEQNMN GLDGLMYMSS TSDAAGNASI TLTFETGTSP DIAQVQVQNK LQLAMPSLPE
AVQQQGISVD KSSSNILMVA AFISDNGSLN QYDIADYVAS NIKDPLSRTA GVGSVQLFGS
EYAMRIWLDP QKLNKYNLVP SDVISQIKVQ NNQISGGQLG GMPQAADQQL NASIIVQTRL
QTPEEFGKIL LKVQQDGSQV LLRDVARVEL GAEDYSTVAR YNGKPAAGIA IKLAAGANAL
DTSRAVKEEL NRLSAYFPAS LKTVYPYDTT PFIEISIQEV FKTLVEAIIL VFLVMYLFLQ
NFRATIIPTI AVPVVILGTF AILSAVGFTI NTLTMFGMVL AIGLLVDDAI VVVENVERVI
AEDKLPPKEA THKSMGQIQR ALVGIAVVLS AVFMPMAFMS GATGEIYRQF SITLISSMLL
SVFVAMSLTP ALCATILKAA PEGGHKPNAL FARFNTLFEK STQHYTDSTR SLLRCTGRYM
VVYLLICAGM AVLFLRTPTS FLPEEDQGVF MTTAQLPSGA TMVNTTKVLQ QVTDYYLTKE
KDNVQSVFTV GGFGFSGQGQ NNGLAFISLK PWSERVGEEN SVTAIIQRAM IALSSINKAV
VFPFNLPAVA ELGTASGFDM ELLDNGNLGH EKLTQARNEL LSLAAQSPNQ VTGVRPNGLE
DTPMFKVNVN AAKAEAMGVA LSDINQTIST AFGSSYVNDF LNQGRVKKVY VQAGTPFRML
PDNINQWYVR NASGTMAPLS AYSSTEWTYG SPRLERYNGI PSMEILGEAA AGKSTGDAMK
FMADLVAKLP AGVGYSWTGL SYQEALSSNQ APALYAISLV VVFLALAALY ESWSIPFSVM
LVVPLGVVGA LLATDLRGLS NDVYFQVGLL TTIGLSAKNA ILIVEFAVEM MQKEGKTPIE
AIIEAARMRL RPILMTSLAF ILGVLPLVIS HGAGSGAQNA VGTGVMGGMF AATVLAIYFV
PVFFVVVEHL FARFKKA
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