Gene EcolC_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0093 
Symbol 
ID6065136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp98498 
End bp99532 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content46% 
IMG OID641599497 
Productputative glycosyl transferase 
Protein accessionYP_001723106 
Protein GI170018152 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.516407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACA GCACCAATAA ACTTAGTGTT ATTATTCCGT TATATAATGC GGGCGATGAT 
TTCCGCACTT GTATGGAATC TTTAATTACG CAAACCTGGA CTGCTCTGGA AATCATTATT
ATTAACGATG GTTCAACGGA TAATTCTGTT GAAATAGCAA AGTATTACGC AGAAAACTAT
CCGCACGTTC GTTTGTTGCA TCAGGCGAAT GCTGGCGCAT CGGTGGCGCG TAATCGTGGG
ATTGAAGTGG CAACGGGCAA ATATGTCGCT TTTGTCGATG CTGACGATGA AGTCTATCCC
ACCATGTACG AAACGCTGAT GACCATGGCG TTAGAGGACG ACCTCGACGT GGCGCAGTGC
AACGCTGACT GGTGTTTTCG TGAAACGGGA GAAACCTGGC AATCCATCCC CACCGATCGC
CTTCGCTCAA CCGGCGTCTT AACCGGCCCG GACTGGCTGC GGATGGGGCT TTCTTCGCGC
CGTTGGACTC ACGTTGTCTG GATGGGGGTT TATCGCCGTG ATGTTATTGT TAAAAATAAC
ATTAAATTTA TTGCCGGATT ACATCATCAG GATATTGTCT GGACAACAGA ATTCATGTTT
AACGCGCTGC GTGCGCGATA TACCGAGCAA TCATTATATA AATATTATCT GCATAATACG
TCAGTGAGTC GGTTGCATAG ACAAGGGAAT AAAAACCTTA ATTATCAACG TCACTATATT
AAGATTACCC GCCTGCTGGA GAAATTAAAT CGAAATTATG CCGACAAAAT TATGATTTAT
CCGGAATTTC ATCAGCAAAT AACTTACGAG GCATTGCGTG TTTGCCATGC GGTGCGCAAA
GAGCCGGATA TTCTTACCCG CCAACGGATG ATTGCCGAGA TATTTACTTC CGGTATGTAT
AAGCGCCTGA TTACCAATGT GCGCAGCGTG AAGGTCGGTT ACCAGGCGTT ACTGTGGTCT
TTCCGCTTAT GGCAATGGCG CGACAAAACG CGGTCGCACC ATCGCATTAC GCGTAGCGCC
TTTAATTTGC GCTAG
 
Protein sequence
MMNSTNKLSV IIPLYNAGDD FRTCMESLIT QTWTALEIII INDGSTDNSV EIAKYYAENY 
PHVRLLHQAN AGASVARNRG IEVATGKYVA FVDADDEVYP TMYETLMTMA LEDDLDVAQC
NADWCFRETG ETWQSIPTDR LRSTGVLTGP DWLRMGLSSR RWTHVVWMGV YRRDVIVKNN
IKFIAGLHHQ DIVWTTEFMF NALRARYTEQ SLYKYYLHNT SVSRLHRQGN KNLNYQRHYI
KITRLLEKLN RNYADKIMIY PEFHQQITYE ALRVCHAVRK EPDILTRQRM IAEIFTSGMY
KRLITNVRSV KVGYQALLWS FRLWQWRDKT RSHHRITRSA FNLR