Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0052 |
Symbol | |
ID | 6068439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 52323 |
End bp | 54089 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641599455 |
Product | hypothetical protein |
Protein accession | YP_001723065 |
Protein GI | 170018111 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAG GTACTATAGT ATCTATATTG ATTCGTATAT TGAAAGAGAA ACGTGATGGT CTGATATTAA TAAATGGGGA ATGGGGTGTA GGTAAGACAT ATTTCCTTCG AACTGAATTT AGAACACTTT ATTCAGATAC GAGTCATTTT TATTTGTCTG TTCTTGGGTT AAACAGTTTA CAAGATTTTA AAGATAGAAT GCTAAGCATA ACGTATCTAA ACACCCCTTC AGAGATAAAA AAACTTGGGG ATTTAACCTC AAGCGCTGCA TCAGCATTAA CCCAAGACGA AAGCACTGGA AAGTTGACAG AACAAATTAT ATCTACCATT TCAGGTGCAA TGAGAGATTA TGTACTTAAG GATCTTTCAG GGGTTTTTGT CATTGATGAT CTAGAAAGAA TCCCTCAATC TTTGAGAGAT GAAATAGCAA CCTTTTGCCT ACAAAGTTAT CAAAATGATA ATCGGTTAGA CTTTATTTTA GTGGGTAACT TTTCAAAGCA GAGTAGTGAG GTATTAAGTC ATAAAGAAAA AGTTGTAAGC GACGAAATAT ATTTCTCTAT TAATAACCTT ACCGATATAT TAGAGCAAAA ACTGGCTCCA TTAGAAGAGA GACATAAATA TTTAATCACT CAGGTTATTA TTGGGTTCGA AGAAACAAAC CTACGAATTA TTAATAGAGT AATTTCAAAA TTGACACCTC TTTTTGAAAA ACAAGAACCT GAGCAAAAAA TCTCTGATAT AGACATCAAA AACCTAGTCA CTTCACTTTG TGCTCATATA ATACTAAAAG AGAAATTTTC ATATCAAGAG AATGATTTTC ATCATAATTA TATCACATCT TCTTTCAAAA CACTTACGAC TTCATCTGAG AATGATCCAG ATAAAATAAG CGAAGAAGAG AGTAACCTTT TAAATATCAC TGCTCATATG ACTTATAACA ACTTAATGGT TCCATATTGT TTTAATGAGA TATCTCAAAA GGATATAATT CCATACATAT TCAATTCACA AGAACCTTTA AAAAAAAGTG ATTATGCCAC ATTAAAACAA CCGGAATGGT ATAATATACC TGAAAATGAT TATTTGGATG AAATTAAAAA AGTAATACTA AAAACTTCAT CACCGACACT ATCTACTTGG CTAATCGCTA CAAACAACTA TATTAGACTC TCAAAATCAA AATACATCCC TCGCATAAGA GGGTTAACCA ACAAAACCAT TGAAAAAAAC AAACGTAGCT TTAGTAATAA AGAAATAAAA GAATATTTCC TAGAATCAAA TCCCAATATT GATAATATTC CACCACATAT ATTAAGGAGA GAAGGAAATG AACTTCATAA TTACTTCCTT GATAAATATT GCGATATAAT AAAGGAGGAG AAAATAAAAG AATTGAAAGA AAAAATGAAT GTTAACGGTT GGAGTGCTAT TGATATGGAT ATTTATCAAT CAAAATTCAA ATTTAATCCA CTTGAAACAT TAGATGTAAA CCTAATCATA CATGGAATAA AAAACACTTG GTCCATTCGC GATATTCAGT TGTTTTCAAA CCATCTATCA TCACTCTATA ACTTCTCAAA TCTTGCGGAC TACCTTTCTG CTGAACTACC ATACCTTAAG AAGCTACATT CAGCCATAAA CGCTCATCAT AAAAAAATTA ACAGTTCTTT TCGACGCGGA GCCATAATTG AACTAACAGA ATGCGTTAAA CGCATAAAAG AAGCTTTAGA ACAAAGCATC GCTTTAAAAG AAGACGCATC GCAATAA
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Protein sequence | MTKGTIVSIL IRILKEKRDG LILINGEWGV GKTYFLRTEF RTLYSDTSHF YLSVLGLNSL QDFKDRMLSI TYLNTPSEIK KLGDLTSSAA SALTQDESTG KLTEQIISTI SGAMRDYVLK DLSGVFVIDD LERIPQSLRD EIATFCLQSY QNDNRLDFIL VGNFSKQSSE VLSHKEKVVS DEIYFSINNL TDILEQKLAP LEERHKYLIT QVIIGFEETN LRIINRVISK LTPLFEKQEP EQKISDIDIK NLVTSLCAHI ILKEKFSYQE NDFHHNYITS SFKTLTTSSE NDPDKISEEE SNLLNITAHM TYNNLMVPYC FNEISQKDII PYIFNSQEPL KKSDYATLKQ PEWYNIPEND YLDEIKKVIL KTSSPTLSTW LIATNNYIRL SKSKYIPRIR GLTNKTIEKN KRSFSNKEIK EYFLESNPNI DNIPPHILRR EGNELHNYFL DKYCDIIKEE KIKELKEKMN VNGWSAIDMD IYQSKFKFNP LETLDVNLII HGIKNTWSIR DIQLFSNHLS SLYNFSNLAD YLSAELPYLK KLHSAINAHH KKINSSFRRG AIIELTECVK RIKEALEQSI ALKEDASQ
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