| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0026 |
|---|
| Symbol | |
|---|
| ID | 3618494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia canis str. Jake |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007354 |
|---|
| Strand | - |
|---|
| Start bp | 29334 |
|---|
| End bp | 30137 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637697959 |
|---|
| Product | diaminopimelate epimerase |
|---|
| Protein accession | YP_302675 |
|---|
| Protein GI | 73666659 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0253] Diaminopimelate epimerase |
|---|
| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGACT TTATAAAAAT GCATGGCACT CTTAATGATT TTGTCATAAT AGATTGCCGA
AGTAAGTTCT ACAATAACAT TGATTATAAA GCAATTGCTA ACAGGAAAAC AGGAATTGGC
TGTGATCAAA TTATTGTCAT AACAAAATCT GAAAAAGCTG ATTGTTTCAT GCATATATAT
AACGCAGATG GAAGTAAAGT TGAAATGTGC GGTAACGCTG CAAGGTGTGT TGCATACCTA
TTAAGTAATG AAAAACAAAA AAACAATGTA ACAATTGAAC TAGCTGATCG CATATTATCA
TGCTTAAGGA TCTCAGAAAA TACTGTACAA GTTAACATGG GAATAGCAAA ATTTCATTGG
ACAGATATAC CTATATCTCA AGAATGTGAT ACATTGCACC TACCAATAAC ATTAGAAATG
CTCAGCGATC CTGTAGGAAT AAATGTAGGA AATCCACATG CAATATTTTT TGTAAATTCA
ATAGAAACAA TCCCACTAGA TAAATTAGGA CCAAAACTAG AAAATCACAA TCTTTTTCCT
AAAAGAGCAA ACATTAGTAT TGCAGAAATC TTATCTAGAA ACAAAATCAA ACTGAGAGTA
TGGGAACGTG GAACTGGAGA AACAGCTTCA TGCGGTAGTG GCGCATGTGC AGCATTAGTT
GCAGCAGTAA GACGTCAGTA CACTGATACA ACAGCAACAA TATGTTTACA AGGTGGTAAC
TTATTAATAT CATACCAGAA TGATAACACT ATTTTAATGG AAGGGATGGT ATCATATACA
TTTCATGGCA TCTACTGTAA TTAA
|
|---|
| Protein sequence | MIDFIKMHGT LNDFVIIDCR SKFYNNIDYK AIANRKTGIG CDQIIVITKS EKADCFMHIY
NADGSKVEMC GNAARCVAYL LSNEKQKNNV TIELADRILS CLRISENTVQ VNMGIAKFHW
TDIPISQECD TLHLPITLEM LSDPVGINVG NPHAIFFVNS IETIPLDKLG PKLENHNLFP
KRANISIAEI LSRNKIKLRV WERGTGETAS CGSGACAALV AAVRRQYTDT TATICLQGGN
LLISYQNDNT ILMEGMVSYT FHGIYCN
|
|---|
| |