| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0067 |
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| Symbol | |
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| ID | 6106569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | + |
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| Start bp | 50338 |
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| End bp | 51309 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641614814 |
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| Product | IS110 family transposase |
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| Protein accession | YP_001739955 |
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| Protein GI | 170650843 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0110214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAC CAAATCTGCA ATGCATGGGT ATTGATGTTG CCAAACTATC GCTGGACATC
GCCACCACCG ACACGATTGA GCCATTCACT GTGGGTAACG ATGAGGATGG TTTCGCTGTT
ATCACAGATA AACTGAAGCA CACCAAAATT AACCTGATTC TCATGGAAGC TACCGGTGGC
CTTGAAGCAG CCATTGCCTG TAAGCTTCAG TCAGAAGGAT ACGATGTGGT TGTGATCAAC
CCACGACAGG CTAGGGATTT TGCCCGTTCA ATGGGATATC TGGCTAAAAC AGATAAACTT
GACGCCGCCA TGCTAGCACA ACTGGCCCTG GTCATTGATC GCCATCCGGA CCGCAGTCGT
TATATACGGC ATCTGCCAGA TGAGGCACGA GCAGTACTTG CCGCAATGGT CGTCCGTCGT
CGTCAGTTGA ACCATATGCT GGTCGCTGAG CGTAATCGTC TCTATCCTTC TCATCCCCAA
AGCAGGAAGA GTATCGATAA CATTATTGAT GCGCTTCAAA ACGAGCTCGA CCGGATCAAT
GAGCAAATGA AACAACACAT GACAGCATTC TTCCAGGAGC AGGCCAGACT GATAGGCAGC
GTGAAAGGCG TCGGCGATAT CACCGTCGCG TCGCTGATTG CCGAACTACC GGAACAGGGG
AAACTCAATC GACGGGAGAT TAGTGCTCTA ACTGGCGTCG CTCCTCTAAA CAGAGACTCC
GGGAAAATGC GAGGGAAACG GACCACGTTT GGTGGCAGAG CCGGAGTGAG AGCAACGTTG
AACATGGCAG CTCTGGTGGC TACGCAGTTT AATCCTGCCA TAAAGCTGTT CTACCAGCGT
TTGCTTGCCG CCGGAAAACC CAAAAAACTT GCTCTGGTCG CCTGCATGCG CAAACTCATC
ACCATTCTGA ATACCATGCT CAGAAAAGGG GAAGAGTGGA ACGCCTCATT TCAATCACAG
GTAATCTCAT GA
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| Protein sequence | MSQPNLQCMG IDVAKLSLDI ATTDTIEPFT VGNDEDGFAV ITDKLKHTKI NLILMEATGG
LEAAIACKLQ SEGYDVVVIN PRQARDFARS MGYLAKTDKL DAAMLAQLAL VIDRHPDRSR
YIRHLPDEAR AVLAAMVVRR RQLNHMLVAE RNRLYPSHPQ SRKSIDNIID ALQNELDRIN
EQMKQHMTAF FQEQARLIGS VKGVGDITVA SLIAELPEQG KLNRREISAL TGVAPLNRDS
GKMRGKRTTF GGRAGVRATL NMAALVATQF NPAIKLFYQR LLAAGKPKKL ALVACMRKLI
TILNTMLRKG EEWNASFQSQ VIS
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