Gene EcSMS35_4556 details

Gene Information

• Locus tag: EcSMS35_4556
• Symbol: rpiB
• ID: 6145609
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli SMS-3-5
• Kingdom: Bacteria
• Replicon accession: NC_010498
• Strand: +
• Start bp: 4658959
• End bp: 4659408
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641619372
• Product: ribose-5-phosphate isomerase B
• Protein accession: YP_001746484
• Protein GI: 170683862
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family; [TIGR01120] ribose 5-phosphate isomerase B

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 64
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAAAGA TTGCATTTGG CTGTGATCAT GTCGGTTTCA TTTTAAAACA TGAAATAGTG 
GCACATTTAG TTGAGCGTGG CGTTGAAGTG ATTGATAAAG GAACCTGGTC GTCAGAGCGT 
ACTGATTATC CGCATTACGC CAGTCAAGTC GCACTGGTCG TTGCTGGCGG AGAGGCTGAT 
GGCGGGATTT TGATTTGTGG CACTGGCGTC GGTATTTCGA TAGCGGCGAA CAAGTTTGCC 
GGAATTCGCG CCGTCGTTTG TAGCGAACCT TATTCCGCGC AACTTTCGCG GCAGCATAAC 
GATACCAACG TGCTGGCTTT TGGTTCACGA GTGGTTGGCC TCGAACTGGC AAAAATGATT 
GTCGATGCGT GGCTGGGCGC ACAGTACGAA GGCGGTCGTC ATCAACAACG CGTGGAGGCG 
ATTACGGCAA TAGAGCAGCG GAGAAATTGA 

 

Protein sequence

MKKIAFGCDH VGFILKHEIV AHLVERGVEV IDKGTWSSER TDYPHYASQV ALVVAGGEAD 
GGILICGTGV GISIAANKFA GIRAVVCSEP YSAQLSRQHN DTNVLAFGSR VVGLELAKMI 
VDAWLGAQYE GGRHQQRVEA ITAIEQRRN