Gene EcSMS35_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1950 
Symbol 
ID6145181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1971181 
End bp1971993 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content54% 
IMG OID641616826 
Productputative methyltransferase 
Protein accessionYP_001744002 
Protein GI170679815 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0292125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATTG ATGATATTGA TTTTGCAGAC CTTTACCTTC AGCAACTCAG GCTGGCCCAT 
CGCACAGAAA AAACGCCGGA TCACTGGGAT CAACGGGCGG AAAAAATGGC GGAAAATTGC
GCCTCGCCTA CGGACAGCTA CCTGCAACAA CTGACCGCTA AAATTGATCT GCAAGGCGCA
CAAACCTTAT TCGATATGGG CTGCGGACCG GGTACCGTAT CGCTGGCGCT GGCTGACAAA
CTCACGACGA TTTATGGCGT TGATTACAGT CAGGGGATGC TGAACGTTGC CGCCCGTCGC
GCCGCCGCGC TAAAGGCAGA CAATGTCCAC TGGATCCAGC GCGCCTGGGA AGAGGACTGG
AGTGACCTGC CACGCTGCGA TATTGCCGTG GCTTCCCGCT CCACTCTGGT GGCTGATATG
CGCCAGGCAA TGAGCAAACT GAATAATCAG GCACGGCTTC GCGTCTATAC GACTCATCTG
GTCAGCACCT CGTTCGTCTC TCCAGCCATT CAGCGGGCGG CTGGTCGGGA AGTGATCGAA
TTACCCAACT ATATATTTGC GCTCAACGTC CTGTATCAGA TGGGAATTTA TGCCCACGTT
GATTTTATCC GTGGACAAAA TTGCCAACAG GATAACAGCA CCTGGGAACG TTTTGAGCAG
AACGTCAGCT GGAGTCTTGG CGCGCTTAAC GACGATGAGC GTGAGCGGTT ATATCACTGG
TATCAACAAC AAGATGCTCG TGCCCTCGCC CCTGCCAGCC GCGACTGGGC GCTCATCTGG
TGGGATAGCG TACCGCAAGA GGCACTGCGA TGA
 
Protein sequence
MLIDDIDFAD LYLQQLRLAH RTEKTPDHWD QRAEKMAENC ASPTDSYLQQ LTAKIDLQGA 
QTLFDMGCGP GTVSLALADK LTTIYGVDYS QGMLNVAARR AAALKADNVH WIQRAWEEDW
SDLPRCDIAV ASRSTLVADM RQAMSKLNNQ ARLRVYTTHL VSTSFVSPAI QRAAGREVIE
LPNYIFALNV LYQMGIYAHV DFIRGQNCQQ DNSTWERFEQ NVSWSLGALN DDERERLYHW
YQQQDARALA PASRDWALIW WDSVPQEALR