Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1950 |
Symbol | |
ID | 6145181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1971181 |
End bp | 1971993 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641616826 |
Product | putative methyltransferase |
Protein accession | YP_001744002 |
Protein GI | 170679815 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0292125 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCATTG ATGATATTGA TTTTGCAGAC CTTTACCTTC AGCAACTCAG GCTGGCCCAT CGCACAGAAA AAACGCCGGA TCACTGGGAT CAACGGGCGG AAAAAATGGC GGAAAATTGC GCCTCGCCTA CGGACAGCTA CCTGCAACAA CTGACCGCTA AAATTGATCT GCAAGGCGCA CAAACCTTAT TCGATATGGG CTGCGGACCG GGTACCGTAT CGCTGGCGCT GGCTGACAAA CTCACGACGA TTTATGGCGT TGATTACAGT CAGGGGATGC TGAACGTTGC CGCCCGTCGC GCCGCCGCGC TAAAGGCAGA CAATGTCCAC TGGATCCAGC GCGCCTGGGA AGAGGACTGG AGTGACCTGC CACGCTGCGA TATTGCCGTG GCTTCCCGCT CCACTCTGGT GGCTGATATG CGCCAGGCAA TGAGCAAACT GAATAATCAG GCACGGCTTC GCGTCTATAC GACTCATCTG GTCAGCACCT CGTTCGTCTC TCCAGCCATT CAGCGGGCGG CTGGTCGGGA AGTGATCGAA TTACCCAACT ATATATTTGC GCTCAACGTC CTGTATCAGA TGGGAATTTA TGCCCACGTT GATTTTATCC GTGGACAAAA TTGCCAACAG GATAACAGCA CCTGGGAACG TTTTGAGCAG AACGTCAGCT GGAGTCTTGG CGCGCTTAAC GACGATGAGC GTGAGCGGTT ATATCACTGG TATCAACAAC AAGATGCTCG TGCCCTCGCC CCTGCCAGCC GCGACTGGGC GCTCATCTGG TGGGATAGCG TACCGCAAGA GGCACTGCGA TGA
|
Protein sequence | MLIDDIDFAD LYLQQLRLAH RTEKTPDHWD QRAEKMAENC ASPTDSYLQQ LTAKIDLQGA QTLFDMGCGP GTVSLALADK LTTIYGVDYS QGMLNVAARR AAALKADNVH WIQRAWEEDW SDLPRCDIAV ASRSTLVADM RQAMSKLNNQ ARLRVYTTHL VSTSFVSPAI QRAAGREVIE LPNYIFALNV LYQMGIYAHV DFIRGQNCQQ DNSTWERFEQ NVSWSLGALN DDERERLYHW YQQQDARALA PASRDWALIW WDSVPQEALR
|
| |