| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0626 |
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| Symbol | ahpC |
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| ID | 6143388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 639795 |
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| End bp | 640358 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641615518 |
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| Product | alkyl hydroperoxide reductase subunit C |
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| Protein accession | YP_001742724 |
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| Protein GI | 170682241 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCTTGA TTAACACCAA AATTAAACCT TTTAAAAACC AGGCATTCAA AAACGGCGAA
TTCATCGAAA TCACCGAAAA AGATACCGAA GGCCGCTGGA GCGTCTTCTT CTTCTACCCG
GCTGACTTTA CTTTCGTATG CCCGACCGAA CTGGGTGACG TTGCTGACCA TTACGAAGAA
CTGCAGAAAC TGGGCGTAGA CGTATACGCA GTATCTACCG ATACTCACTT CACCCACAAA
GCATGGCACA GCAGCTCTGA AACCATCGCT AAAATCAAAT ATGCGATGAT CGGCGACCCG
ACTGGCGCCC TGACCCGTAA CTTCGACAAC ATGCGTGAAG ATGAAGGTCT GGCTGACCGT
GCGACCTTCG TTGTTGACCC GCAGGGTATC ATCCAGGCAA TCGAAGTTAC CGCTGAAGGC
ATTGGCCGTG ACGCGTCTGA CCTGCTGCGT AAAATCAAAG CAGCACAGTA CGTAGCTTCT
CACCCAGGTG AAGTTTGCCC GGCTAAATGG AAAGAAGGTG AAGCAACTCT GGCTCCGTCT
CTGGACCTGG TTGGTAAAAT CTAA
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| Protein sequence | MSLINTKIKP FKNQAFKNGE FIEITEKDTE GRWSVFFFYP ADFTFVCPTE LGDVADHYEE
LQKLGVDVYA VSTDTHFTHK AWHSSSETIA KIKYAMIGDP TGALTRNFDN MREDEGLADR
ATFVVDPQGI IQAIEVTAEG IGRDASDLLR KIKAAQYVAS HPGEVCPAKW KEGEATLAPS
LDLVGKI
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