| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0091 |
|---|
| Symbol | murF |
|---|
| ID | 6146512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 101283 |
|---|
| End bp | 102641 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641614992 |
|---|
| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
|---|
| Protein accession | YP_001742208 |
|---|
| Protein GI | 170682834 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
|---|
| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.667428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGCG TAACCCTTAG CCAACTTACC GATATTCTCA ACGGTGAACT GCAAGGTGCA
GATATTACCC TTGATGCTGT AACCACTGAC ACGCGAAAAC TGACGCCGGG CTGCCTGTTT
GTTGCCCTGA AAGGCGAACG TTTCGATGCT CATGATTTTG CCGACCAGGC GAAAGCTGGC
GGCGCAGGCG CACTACTGGT TAGCCGTCCG CTGGATATCG ATCTGCCGCA GTTAATCGTC
AAGGATACGC GTCTGGCGTT TGGTGAACTG GCTGCATGGG TTCGCCAGCA AGTTCCGGCG
CGCGTGGTTG CTCTGACAGG TTCCTCCGGC AAAACATCCG TTAAAGAGAT GACGGCGGCG
ATTTTAAGCC AGTGCGGCAA CACGCTTTAT ACGGCAGGCA ATCTCAACAA CGACATCGGC
GTACCGATGA CGCTGTTGCG CTTAACGCCG GAATACGATT ACGCAGTTAT TGAACTTGGC
GCGAACCATC AGGGCGAAAT TGCCTGGACT GTGAGTCTGA CTCGCCCGGA AGCGGCGCTG
GTCAACAACC TGGCAGCGGC ACATCTGGAA GGTTTTGGCT CGCTTGCGGG TGTCGCGAAA
GCGAAAGGTG AAATCTTTAG CGGCCTGCCG GAAAACGGTA TCGCCATCAT GAACGCTGAC
AACAACGACT GGCTGAACTG GCAGAGCGTA ATTGGCTCAC GCAAAGTGTG GCGTTTCTCA
CCCAATGCCG CCAACAGCGA TTTCACCGCC ACCAATATCC ATGTGACTTC GCACGGTACG
GAATTTACCC TGCAAACCCC AACCGGTAGC GTGGATGTTC TGCTGCCGTT GCCGGGGCGT
CACAATATTG CGAATGCGCT GGCAGCCGCT GCGCTCTCCA TGGCCGTGGG CGCAACGCTT
GATGCTATCA AAGCGGGGCT GGCAAATCTG AAAGCTGTTC CAGGCCGTCT GTTCCCCATT
CAACTGGTAG AAAACCAGTT GCTGCTCGAC GACTCCTACA ACGCCAATGT TGGTTCAATG
ACTGCAGCAG TCCAGGTACT GGCTGAAATG CCGGGCTACC GCGTGCTGGT GGTGGGCGAT
ATGGCGGAAC TGGGCGCTGA AAGCGAAGCC TGCCATATAC AGGTGGGCGA AGCGGCAAAA
GCAGCTGGTA TTGACCGCGT GTTAAGCGTG GGCAAACAAA GCCATGCTAT CAGCACCGCC
AGCGGCGTTG GCGAACATTT TTCCGATAAA ACTGCGCTTA TCGCGCGTCT TAAATCACTG
ATTGCTGAGC AACAGGTAAT TACGATTTTA GTTAAGGGTT CACGTAGTGC TGCCATGGAA
GAGGTAGTAC GCGCTTTACA GGAGAATGGG ACATGTTAG
|
|---|
| Protein sequence | MISVTLSQLT DILNGELQGA DITLDAVTTD TRKLTPGCLF VALKGERFDA HDFADQAKAG
GAGALLVSRP LDIDLPQLIV KDTRLAFGEL AAWVRQQVPA RVVALTGSSG KTSVKEMTAA
ILSQCGNTLY TAGNLNNDIG VPMTLLRLTP EYDYAVIELG ANHQGEIAWT VSLTRPEAAL
VNNLAAAHLE GFGSLAGVAK AKGEIFSGLP ENGIAIMNAD NNDWLNWQSV IGSRKVWRFS
PNAANSDFTA TNIHVTSHGT EFTLQTPTGS VDVLLPLPGR HNIANALAAA ALSMAVGATL
DAIKAGLANL KAVPGRLFPI QLVENQLLLD DSYNANVGSM TAAVQVLAEM PGYRVLVVGD
MAELGAESEA CHIQVGEAAK AAGIDRVLSV GKQSHAISTA SGVGEHFSDK TALIARLKSL
IAEQQVITIL VKGSRSAAME EVVRALQENG TC
|
|---|
| |