| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0074 |
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| Symbol | sgrR |
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| ID | 6145976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 83496 |
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| End bp | 85154 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641614975 |
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| Product | transcriptional regulator SgrR |
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| Protein accession | YP_001742191 |
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| Protein GI | 170681588 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.492998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCTG CTCGTCTGCA ACAACAGTTC ATCCGCCTGT GGCAATGCTG CGAGGGTAAA
TCGCAGGACA CAACGCTCAA CGAACTGGCA GCGTTATTGA GCTGCTCGCG TCGTCATATG
CGCACCCTGC TCAACACCAT GCAGGATCGC GGCTGGCTGA CGTGGGAAGC GGAAGTCGGG
CGCGGTAAAC GCTCGCGTCT GACATTCCTC TATACCGGGC TGGCGCTTCA GCAACAGCGG
GCGGAAGACC TGCTGGAGCA GGATCGTATC GATCAACTGG TGCAACTGGT TGGCGACAAA
GCGACTGTGC GGCAAATGCT GGTTTCTCAT CTGGGCCGCA GCTTCCGCCA GGGGCGACAC
ATCCTGCGTG TGCTCTACTA TCGTCCGTTG CGTAATCTGC TACCTGGCAG CGCATTACGC
CGTTCCGAAA CCCATATCGC CCGGCAAATC TTCAGTTCGC TAACGCGCAT AAATGAGGAA
AATGGGGAAC TGGAAGCAGA CATCGCCCAC CACTGGCAGC AAATATCACC GCTTCACTGG
CGTTTCTTTT TGCGTCCAGG AGTCCATTTT CATCATGGTC GTGAACTGGA AATGGACGAT
GTGATCGCCT CTTTAAAACG GATCAATACG CTGCCGCTCT ATTCGCATAT TGCTGAAATT
GTATCGCCGA CGCCCTGGAC GCTGGATATC CACCTCACGC AGCCGGATCG CTGGTTGCCG
TTACTGCTGG GGCAAGTTCC GGCGATGATC CTGCCGCGCG AATGGGAAAC CCTCAGTAAC
TTTGCCAGCC ATCCCATCGG CACCGGTCCG TATGCGGTGA TCCGCAACAG CACCAATCAA
CTGAAAATTC AGGCATTCGA TGACTTCTTC GGTTACCGGG CATTAATCGA CGAAGTTAAC
GTCTGGGTTC TGCCGGAAAT TGCCGACGAG CCAGCCGGAG GGCTGATGCT AAAAGGGCCA
CAGGGCGAGG AAAAAGAGAT TGAAAGCCGC CTGGAGGAAG GTTGCTACTA TTTACTGTTC
GACAGCCGCA CCCATCGCGG GGCGAATCAG CAAGTCAGGG ACTGGGTAAG CTATGTGCTT
TCTCCAACTA ATCTGGTCTA TTTCGCTGAG GAACAGTACC AGCAACTGTG GTTCCCGGCT
TATGGACTGC TCCCCCGTTG GCACCATGCT CGTCCGACAC ATTGCGAAAA ACCCGCCGGG
CTGGAAAGCC TCACCCTGAC CTTTTATCAG GATCATATTG AGCATCGAGT GATTGCCGGG
ATCATGCAGC AGATTCTGGC AAGTCACCAG GTCACGCTGG AAATCAAAGA GATCAGCTAC
GATCAGTGGC ATGAAGGAGA GATCGAGAGC GATATCTGGC TTAACAGCGC CAACTTTACG
CTGCCGCTGG ATTTTTCGCT GTTCGCGCAC TTGTGCGAGG TGCCGCTGCT CCAACACTGT
CTTCCGATCG ACTGGCAAGC CGACGCCGCC CGCTGGCGCA ATGGCGAAAT GAACCTGGCG
AACTGGTGCC AGCAACTGGT CGCCAGCAAA GCAATGGTGC CGCTTATCCA CCACTGGCTG
ATCATTCAGG GGCAACGCAG TATGCGCGGT CTACGTATGA ACACCCTCGG CTGGTTCGAT
TTTAAATCAG CGTGGTTTGC GCCGCCGGAT CCAGAGTAG
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| Protein sequence | MPSARLQQQF IRLWQCCEGK SQDTTLNELA ALLSCSRRHM RTLLNTMQDR GWLTWEAEVG
RGKRSRLTFL YTGLALQQQR AEDLLEQDRI DQLVQLVGDK ATVRQMLVSH LGRSFRQGRH
ILRVLYYRPL RNLLPGSALR RSETHIARQI FSSLTRINEE NGELEADIAH HWQQISPLHW
RFFLRPGVHF HHGRELEMDD VIASLKRINT LPLYSHIAEI VSPTPWTLDI HLTQPDRWLP
LLLGQVPAMI LPREWETLSN FASHPIGTGP YAVIRNSTNQ LKIQAFDDFF GYRALIDEVN
VWVLPEIADE PAGGLMLKGP QGEEKEIESR LEEGCYYLLF DSRTHRGANQ QVRDWVSYVL
SPTNLVYFAE EQYQQLWFPA YGLLPRWHHA RPTHCEKPAG LESLTLTFYQ DHIEHRVIAG
IMQQILASHQ VTLEIKEISY DQWHEGEIES DIWLNSANFT LPLDFSLFAH LCEVPLLQHC
LPIDWQADAA RWRNGEMNLA NWCQQLVASK AMVPLIHHWL IIQGQRSMRG LRMNTLGWFD
FKSAWFAPPD PE
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