Gene EcSMS35_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0039 
SymbolcaiB 
ID6145771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp43077 
End bp44294 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content53% 
IMG OID641614940 
Productcrotonobetainyl-CoA:carnitine CoA-transferase 
Protein accessionYP_001742156 
Protein GI170681966 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCATC TACCCATGCC GAAATTCGGG CCGTTGGCCG GATTGCGCGT TGTCTTCTCC 
GGTATCGAAA TCGCCGGACC GTTTGCCGGG CAAATGTTCG CAGAATGGGG TGCGGAAGTT
ATCTGGATCG AGAACGTCGC CTGGGCCGAC ACCATTCGCG TTCAACCGAA CTACCCGCAA
CTCTCCCGCC GCAATTTGCA CGCGCTGTCG TTAAATATTT TCAAAGATGA AGGCCGCGAA
GCGTTTCTGA AATTAATGGA AACCACCGAT ATCTTCATCG AAGCCAGTAA AGGTCCGGCC
TTTGCCCGTC GTGGCATTAC CGATGAAGTA CTGTGGCAGC ACAACCCGAA ACTGGTTATC
GCTCACCTGT CCGGTTTTGG TCAGTACGGC ACCGAGGAGT ACACCAATCT TCCGGCCTAT
AACACTATCG CCCAGGCCTT TAGTGGTTAC CTGATTCAGA ACGGTGATGT TGACCAGCCA
ATGCCTGCCT TCCCGTATAC CGCCGATTAC TTTTCTGGCC TGACTGCCAC CACGGCGGCG
CTGGCAGCAC TGCATAAAGT GCGTGAAACC GGCAAAGGCG AAAGCATCGA CATCGCCATG
TATGAAGTGA TGTTGCGCAT GGGCCAGTAC TTCATGATGG ATTACTTCAA CGGCGGCGAA
ATGTGCCCGC GCATGACCAA AGGTAAAGAT CCCTACTACG CCGGTTGCGG TCTGTATAAA
TGCGCCGACG GCTACATCGT GATGGAACTG GTGGGCATTA CTCAAATTGC AGAGTGCTTT
AAAGATATTG GCCTCGCGCA TCTGCTCGGC ACGCCAGAAA TTCCGGAAGG CACTCAACTT
ATACACCGTA TCGAATGCCC TTACGGCCCA CTGGTAGAAG AGAAACTCGA TGCCTGGCTG
GCGGCACATA CCATCGCAGA AGTTAAAGAA CGCTTTGCCG AACTGAATAT CGCCTGTGCC
AAAGTACTGA CCGTACCGGA ACTGGAAAGC AATCCACAGT ATGTGGCTCG CGAATCAATC
ACTCAGTGGC AAACGATGGA TGGTCGCACC TGCAAAGGGC CGAACATCAT GCCGAAATTC
AAAAATAACC CCGGACAAAT CTGGCGCGGA ATGCCCTCAC ATGGCATGGA CACGGCTGCC
ATTTTGAAAA ATATCGGCTA CAGCGAAAAC GACATTCAGG AGTTGGTCAG CAAAGGTCTG
GCCAAAGTTG AGGACTAA
 
Protein sequence
MDHLPMPKFG PLAGLRVVFS GIEIAGPFAG QMFAEWGAEV IWIENVAWAD TIRVQPNYPQ 
LSRRNLHALS LNIFKDEGRE AFLKLMETTD IFIEASKGPA FARRGITDEV LWQHNPKLVI
AHLSGFGQYG TEEYTNLPAY NTIAQAFSGY LIQNGDVDQP MPAFPYTADY FSGLTATTAA
LAALHKVRET GKGESIDIAM YEVMLRMGQY FMMDYFNGGE MCPRMTKGKD PYYAGCGLYK
CADGYIVMEL VGITQIAECF KDIGLAHLLG TPEIPEGTQL IHRIECPYGP LVEEKLDAWL
AAHTIAEVKE RFAELNIACA KVLTVPELES NPQYVARESI TQWQTMDGRT CKGPNIMPKF
KNNPGQIWRG MPSHGMDTAA ILKNIGYSEN DIQELVSKGL AKVED