| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0006 |
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| Symbol | agcS |
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| ID | 6146281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 6415 |
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| End bp | 7845 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641614907 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_001742123 |
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| Protein GI | 170680075 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGATT TTTTCTCCTT TATTAACAGC GTCCTTTGGG GATCGGTAAT GATTTACCTG
CTCTTCGGCG CAGGTTGTTG GTTCACTTTT CGCACCGGAT TTGTGCAGTT TCGCTACATC
CGCCAGTTTG GCAAAAGTCT TAAAAATAGC ATTCATCCAC AGCCAGGCGG TTTAACCTCA
TTTCAGTCAT TGTGTACCAG TCTTGCGGCG CGCGTGGGTA GCGGCAACCT GGCTGGCGTT
GCGCTGGCTA TTACCGCCGG TGGACCAGGT GCCGTCTTCT GGATGTGGGT TGCCGCGTTT
ATCGGCATGG CGACCTCGTT TGCCGAATGT TCCCTTGCAC AACTTTATAA AGAACGTGAC
GTTAATGGGC AGTTTCGTGG CGGACCGGCA TGGTATATGG CGCGCGGGCT GGGGATGCGC
TGGATGGGCG TTCTGTTCGC CCTCTTTTTG CTCATCGCCT ACGGCATAAT TTTCAGCGGA
GTTCAGGCGA ACGCCGTTGC CCGAGCCCTG AGTTTTTCTT TTGATTTTCC TCCGCTGGTG
ACAGGCATTA TTCTCGCTGT CTTTGCTCTG CTGGCAATCA CTCGCGGTCT TCATGGCGTC
GCCCGGCTCA TGCAGGGGTT TGTCCCGTTG ATGGCGATAA TCTGGGTACT GACCAGCCTG
GTAATTTGCG TAATGAATAT CGGGCAACTT CCCCACGTCA TTTGGTCTAT TTTTGAGAGT
GCTTTTGGCT GGCAGGAAGC GGCAGGCGGC GCGGCGGGAT ATACCTTAAG CCAGGCGATT
ACTAACGGTT TTCAGCGCAG TATGTTTTCC AATGAGGCGG GAATGGGGTC GACGCCAAAC
GCGGCAGCGG CAGCGGCGTC CTGGCCTCCG CATCCCGCAG CGCAAGGAAT TGTCCAGATG
ATTGGCATTT TTATCGACAC CCTGGTCATC TGTACGGCAA GCGCCATGCT GATATTACTG
GCGGGTAACG GCACAACCTA CATGCCGCTG GAAGGTATTC AGCTTATCCA GAAGGCGATG
CGGGTGTTAA TGGGTTCCTG GGGTGCTGAG TTTGTTACCC TCGTGGTTAT TCTGTTTGCC
TTCAGCTCCA TCGTTGCCAA CTACATTTAT GCCGAAAACA ATCTCTTCTT TTTACGCCTG
AACAACCCTA AAGCGATCTG GTGTCTGCGG ATCTGCACCT TCGCAACGGT CATCGGCGGC
ACCTTGCTAA GTCTTCCGCT GATGTGGCAA CTGGCAGATA TCATAATGGC CTGCATGGCT
ATTACCAATT TGACCGCCAT ATTACTGCTC TCGCCTGTGG TTCATACCAT TGCCAGTGAT
TATCTACGCC AGCGTAAACT CGGCGTGCGC CCGGTGTTTG ATCCGTTGCG TTATCCGGAG
ATCGGTCGCC AGCTTTCTCC AGACGCGTGG GATGACGTTT CGCAGGAGTA A
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| Protein sequence | MPDFFSFINS VLWGSVMIYL LFGAGCWFTF RTGFVQFRYI RQFGKSLKNS IHPQPGGLTS
FQSLCTSLAA RVGSGNLAGV ALAITAGGPG AVFWMWVAAF IGMATSFAEC SLAQLYKERD
VNGQFRGGPA WYMARGLGMR WMGVLFALFL LIAYGIIFSG VQANAVARAL SFSFDFPPLV
TGIILAVFAL LAITRGLHGV ARLMQGFVPL MAIIWVLTSL VICVMNIGQL PHVIWSIFES
AFGWQEAAGG AAGYTLSQAI TNGFQRSMFS NEAGMGSTPN AAAAAASWPP HPAAQGIVQM
IGIFIDTLVI CTASAMLILL AGNGTTYMPL EGIQLIQKAM RVLMGSWGAE FVTLVVILFA
FSSIVANYIY AENNLFFLRL NNPKAIWCLR ICTFATVIGG TLLSLPLMWQ LADIIMACMA
ITNLTAILLL SPVVHTIASD YLRQRKLGVR PVFDPLRYPE IGRQLSPDAW DDVSQE
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