Gene EcHS_A0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A0539 
SymbolacrA 
ID5590988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp550491 
End bp551684 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content54% 
IMG OID640919723 
Productacriflavine resistance protein A 
Protein accessionYP_001457307 
Protein GI157159989 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA ACAGAGGGTT TACGCCTCTG GCGGTCGTTC TGATGCTCTC AGGCAGCTTA 
GCCCTAACAG GATGTGACGA CAAACAGGCC CAACAAGGTG GCCAGCAGAT GCCCGCCGTT
GGCGTAGTAA CAGTCAAAAC TGAACCTCTG CAGATCACAA CCGAGCTTCC GGGTCGCACC
AGTGCCTACC GGATCGCAGA AGTTCGTCCT CAAGTTAGCG GGATTATCCT GAAGCGTAAT
TTCAAAGAAG GTAGCGACAT CGAAGCAGGT GTCTCTCTCT ATCAGATTGA TCCTGCGACC
TATCAGGCGA CATACGACAG TGCGAAAGGT GATCTGGCGA AAGCCCAGGC TGCAGCCAAT
ATCGCGCAAT TGACGGTGAA TCGTTATCAG AAACTGCTCG GTACTCAGTA CATCAGTAAG
CAAGAGTACG ATCAGGCTCT GGCTGATGCG CAACAGGCGA ATGCTGCGGT AACTGCGGCG
AAAGCTGCCG TTGAAACTGC GCGGATCAAT CTGGCTTACA CCAAAGTCAC CTCTCCGATT
AGCGGTCGCA TTGGTAAGTC GAACGTGACG GAAGGCGCAT TGGTACAGAA CGGTCAGGCG
ACTGCGCTGG CAACCGTGCA GCAACTTGAT CCGATCTACG TTGATGTGAC CCAGTCCAGC
AACGACTTCC TGCGCCTGAA ACAGGAACTG GCGAATGGCA CGCTGAAACA AGAGAACGGC
AAAGCCAAAG TGTCACTGAT CACCAGTGAC GGCATTAAGT TCCCGCAGGA CGGTACGCTG
GAATTCTCTG ACGTTACCGT TGATCAGACC ACTGGGTCTA TCACCCTACG CGCTATCTTC
CCGAACCCGG ATCACACTCT GCTGCCGGGT ATGTTCGTGC GCGCACGTCT GGAAGAAGGG
CTTAATCCAA ACGCTATTTT AGTCCCGCAA CAGGGCGTAA CCCGTACGCC GCGTGGCGAT
GCCACCGTAC TGGTAGTTGG CGCGGATGAC AAAGTGGAAA CCCGTCCGAT CGTTGCAAGC
CAGGCTATTG GCGATAAGTG GCTGGTGACA GAAGGTCTGA AAGCAGGCGA TCGCGTAGTA
ATAAGTGGGC TGCAGAAAGT GCGTCCTGGT GTCCAGGTAA AAGCACAAGA AGTTACCGCT
GATAATAACC AGCAAGCCGC AAGCGGTGCT CAGCCTGAAC AGTCCAAGTC TTAA
 
Protein sequence
MNKNRGFTPL AVVLMLSGSL ALTGCDDKQA QQGGQQMPAV GVVTVKTEPL QITTELPGRT 
SAYRIAEVRP QVSGIILKRN FKEGSDIEAG VSLYQIDPAT YQATYDSAKG DLAKAQAAAN
IAQLTVNRYQ KLLGTQYISK QEYDQALADA QQANAAVTAA KAAVETARIN LAYTKVTSPI
SGRIGKSNVT EGALVQNGQA TALATVQQLD PIYVDVTQSS NDFLRLKQEL ANGTLKQENG
KAKVSLITSD GIKFPQDGTL EFSDVTVDQT TGSITLRAIF PNPDHTLLPG MFVRARLEEG
LNPNAILVPQ QGVTRTPRGD ATVLVVGADD KVETRPIVAS QAIGDKWLVT EGLKAGDRVV
ISGLQKVRPG VQVKAQEVTA DNNQQAASGA QPEQSKS