Gene EcE24377A_1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_1075 
Symbol 
ID5589090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand+ 
Start bp1099799 
End bp1100428 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content48% 
IMG OID640924778 
ProductTfoX family protein 
Protein accessionYP_001462192 
Protein GI157159114 
COG category[K] Transcription 
COG ID[COG3070] Regulator of competence-specific genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000000000055454 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCC TCTCCTATAA GCGGATCTAT AAATCACAAG AATACCTGGC AACGTTGGGC 
ACAATTGAAT ACCGATCATT GTTTGGCAGT TACAGCCTGA CCGTTGACGA CACGGTGTTT 
GCGATGGTTT CTGATGGTGA GTTGTATCTT CGGGCTTGTG AGCAAAGTGC ACAGTACTGT 
GTAAAACATC CGCCTGTCTG GCTGACATAT AAAAAGTGTG GCCGATCCGT TACCCTCAAT 
TACTATCGGG TTGATGAAAG TCTATGGCGA AATCAACTGA AGCTGGTGCG TCTGTCGAAA 
TATTCTCTCG ATGCAGCGCT GAAAGAGAAA AGCACGCGCA ATACCCGGGA AAGACTGAAA 
GATTTGCCCA ATATGTCTTT TCATCTGGAA GCGATTCTCG GGGAGGTGGG GATTAAGGAT 
GTACGGGCGT TACGTATACT TGGGGCAAAA ATGTGTTGGT TGCGACTGCG GCAGCAAAAC 
AGTCTGGTGA CAGAAAAGAT TCTGTTTATG CTTGAAGGTG CCATTATCGG CATTCATGAA 
GCTGCGCTCC CGGTGGCACG CCGCCAGGAG CTTGCAGAAT GGGCTGACTC TCTTACGCCG 
AAACAGGAGT TTCCTGCGGA ACTTGAGTAA
 
Protein sequence
MKSLSYKRIY KSQEYLATLG TIEYRSLFGS YSLTVDDTVF AMVSDGELYL RACEQSAQYC 
VKHPPVWLTY KKCGRSVTLN YYRVDESLWR NQLKLVRLSK YSLDAALKEK STRNTRERLK 
DLPNMSFHLE AILGEVGIKD VRALRILGAK MCWLRLRQQN SLVTEKILFM LEGAIIGIHE 
AALPVARRQE LAEWADSLTP KQEFPAELE