| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0289 |
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| Symbol | |
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| ID | 5589443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 311933 |
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| End bp | 315067 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640924014 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_001461443 |
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| Protein GI | 157157518 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGCG AAGACGATTT AGAACAGCAA AGCCTGCAAT GGTTTGCTGA ACTGGGCTGG
GAAGTATTGC ACGGGCCGGA TATTGCGCCA GATGGCAACA ATCCGCTGCG TGCGTCGTTC
CACGATGTGT TTTTGCGCCC GGTGCTACTG GAGCAGTTGC AAAAGATTAA CCCACATCTC
CCGGTTGCCG TGCTGGATGA GGTGATACTG CGTATCGCCC ATGCGCAAAG CCCGGATCTG
GTCGTCAGTA ACAAAGCCTT CCATCACCTG CTGCTCGACG GCGTGCCGGT GCAGTACAAG
CAGGATGACA AAGTTATCCA CGACAAAGCG CTACTGATGG ATTTTAACCA CCCAAATAAT
AACCACTTTA CGGTGGTGAA TCAGGTGGCC ATCCAGGGAA CGAAGCAGGT ACGTCGCCCG
GACGTTATCT GCTATATCAA CGGATTGCCA GTAGTAGTGA TTGAGCTGAA AAGCCCGATT
GATGCTAATG CCGATATCTG GGCGGCATTT AATCAGTTGC AGACCTATAA AAACGAACTC
AGCGATCTGT TCATCTGCAA CGAAGCGCTG GTGGTCAGCG ATGGCTACAA CGCCCGTATT
GGCTCTCTCA CCGCGAACGA AGAGCGCTTC TTGCCGTGGA AAACGCTGTC TAATGAAGAC
GACAAACCGC TGTTTGAATG GCAGCTTGAA ACGGTAGTAA AAGGGTTCTT TAACCGCGAA
CTGCTGCTCG ACTACATTCG TTACTTCATC CTGTTTGAAA GCGACGGCAA ACGACTGATT
AAAAAGATTG CCGCTTACCA CCAATTCCAC GCAGTACGTG AAGCGGTGAC GGCGACGATT
GTGGCCTCTA CCGGTAAACA CTTGCCGCTG CGCAGCAACA TCACGCCAGG CAGTAAAAAA
GCCGGTGTGG TGTGGCATAC GCAGGGTTCC GGTAAGAGTA TCTCGATGTG TTGTTACGCC
GGAAAACTGC TACAACAAGC GGAAATGAAC AACCCGACCA TCGTGGTGGT GACCGACCGT
AACGATCTCG ACGGCCAACT GTATGCCACC TTCTGCCAGG CACAGGATTT GCTTAAGCAG
GAACCGTTAC AGGCAAACGA TCGCGACCAG CTCCGCGAGA TGCTCAATGT CCGTGAATCA
GGCGGGATTA TTTTTACCAC CGTACAAAAA TTTGCCCCGC TTGATGGCGA ACAGACTCAC
CCGGCGCTAA ACCTGCGCAG CAATATCGTC GTCATTTCCG ATGAAGCGCA CCGCAGCCAG
TATGGTCTTA GCGCCACGCT GAACCGGGAG ACTGGCGCTT ATAAATACGG TTACGCCAAA
CATATGCGCG ATGCGTTACC CAATGCGTCG TTTATGGGCT TTACCGGAAC ACCGGTTTCT
TCCGAAGATA AAGACACCCG CGCGGTGTTT GGTGATTACG TCTCTATCTA CGATATACAG
GATGCGGTGG AAGATGGCGC AACCGTGCCT ATCTACTATG AATCGCGCCT GGCAAAACTC
GACCTCAACC ACGAAGAGCT GGAAACGCTG TCTAATCAGG TGGATGAGCT GGTCGAAGAT
GAAGAGACCG ATCAGAAAGA GAAAACCAAA AGTGACTGGA GCCGTCTGGA AAAACTGGTT
GGTTCTGAAC CTCGTATCAA TGAGGTGGCC GCCGATCTGG TTCAGCATTT TGAGGCACGT
AACGCCACAA TGAATGGCAA AGCAATGATT GTTGCCATGA GCCGTGAGAT CTGCGTGAAG
CTGTATGATG CGCTGGTGGC TCTACGCCCG GAATGGCACA GTGATGACGT CGAGAAAGGT
GAAATCAAAA TCATCATGAC CGGCTCAGCC TCCGATAATA AATTCCTTCA GCCGCACATC
TACAATAAGC AAACCAAAAA ACGCCTTGAA GCGCGCTTTA AAGATCTCAA CGACCCGTTG
AAACTGGTGA TTGTGCGCGA TATGTGGCTT ACCGGGTTTG ATGCGCCATG TTGTCATACC
ATGTATATCG ACAAACCGAT GCGCGGGCAT AATCTGATGC AGGCCATTGC GCGCGTCAAC
CGCGTCTTCA AAGATAAACC GGGCGGTTTA GTGGTGGATT ACATCGGTAT CGCCAATGAA
CTGAAACAGG CGCTGAAAAC TTATACCGAT TCAAAAGGTA AAGGACAGAC GACAGTCGAT
GCTCATGAAG CGTTCTCCAT CCTGCTTGAA AAGCTGGATG TGATTCATGG AATGTTTGCC
AAAACACCAA CCGCCGCCGG GTTTGATTAC ACCGGTTTTG CAGAGGTGCC CCAACGGTTT
TTACTCAAAG CCGCAGATTA TGTGCTGGGC CTTGATGACG GTAAGAAGCG CTTTTTCGAT
GTCGTGCTGG CGATGAACAA AGCCTGGTCG CTGTGCAGTA CGTTAGATGA AGCTAAACCC
TTGCAAAAAG AGATCGCGTT TTTGTCGGCG GTGAAAGTGG CGATTATCAA GCTGACGACA
ACCGACAAAA AATTCAGTCA GTCAGAGAAA AATACGCTAC TCGGTAAAAT CCTCGATAAC
GCCATTATTG CGACGGGCGT GGATGATGTG TTTGCGCTGG CGGGTCTGGA TAAGCCGAAT
ATTGGATTGT TGTCAGACGA GTTTCTGGAA GAAGTGCGCG AATTGCCGCA GCGTAATCTG
GCAGTCGAGT TGCTGGAGAA ACTGCTGAAC GACGGCATTC ATGCCCGCAC CAAAAACAAC
GTGGTGCAGG AGAAGAAATA CTCAGATCGC CTGAAAGCCG TGCTGCTCAA ATACAATAAC
CGCGCCATTG AAACTGCGCA GGTGATTGAA GAACTGATCC AGATGGCAAA AGAGTTTCAG
GAAGCGATGG CGCGTGATGA AGCGCTGGGG CTAAACCCGG ACGAAATCGC GTTCTACGAT
GCGCTGGCAG AAAACGAAAG TGCGGTACGG GAGCTGGGTG ATGACGTCCT TAAGAAACTG
GCTATCGAAG TCACGTTAAA ATTGCGCCAG TCCACAACCG TAGACTGGCA GGTGCGAGAA
AGCGTGCGTG CGCGGTTACG TATTCTGGTG CGTCAGACGC TGCGTAAGTA CAAGTATCCG
CCAGATAAAA CACCTTATGC AGTTGAACTG ATACTGAAGC AGGCTGAAGT GGTGTCGAAC
AGCTGGACGG TATAG
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| Protein sequence | MLSEDDLEQQ SLQWFAELGW EVLHGPDIAP DGNNPLRASF HDVFLRPVLL EQLQKINPHL
PVAVLDEVIL RIAHAQSPDL VVSNKAFHHL LLDGVPVQYK QDDKVIHDKA LLMDFNHPNN
NHFTVVNQVA IQGTKQVRRP DVICYINGLP VVVIELKSPI DANADIWAAF NQLQTYKNEL
SDLFICNEAL VVSDGYNARI GSLTANEERF LPWKTLSNED DKPLFEWQLE TVVKGFFNRE
LLLDYIRYFI LFESDGKRLI KKIAAYHQFH AVREAVTATI VASTGKHLPL RSNITPGSKK
AGVVWHTQGS GKSISMCCYA GKLLQQAEMN NPTIVVVTDR NDLDGQLYAT FCQAQDLLKQ
EPLQANDRDQ LREMLNVRES GGIIFTTVQK FAPLDGEQTH PALNLRSNIV VISDEAHRSQ
YGLSATLNRE TGAYKYGYAK HMRDALPNAS FMGFTGTPVS SEDKDTRAVF GDYVSIYDIQ
DAVEDGATVP IYYESRLAKL DLNHEELETL SNQVDELVED EETDQKEKTK SDWSRLEKLV
GSEPRINEVA ADLVQHFEAR NATMNGKAMI VAMSREICVK LYDALVALRP EWHSDDVEKG
EIKIIMTGSA SDNKFLQPHI YNKQTKKRLE ARFKDLNDPL KLVIVRDMWL TGFDAPCCHT
MYIDKPMRGH NLMQAIARVN RVFKDKPGGL VVDYIGIANE LKQALKTYTD SKGKGQTTVD
AHEAFSILLE KLDVIHGMFA KTPTAAGFDY TGFAEVPQRF LLKAADYVLG LDDGKKRFFD
VVLAMNKAWS LCSTLDEAKP LQKEIAFLSA VKVAIIKLTT TDKKFSQSEK NTLLGKILDN
AIIATGVDDV FALAGLDKPN IGLLSDEFLE EVRELPQRNL AVELLEKLLN DGIHARTKNN
VVQEKKYSDR LKAVLLKYNN RAIETAQVIE ELIQMAKEFQ EAMARDEALG LNPDEIAFYD
ALAENESAVR ELGDDVLKKL AIEVTLKLRQ STTVDWQVRE SVRARLRILV RQTLRKYKYP
PDKTPYAVEL ILKQAEVVSN SWTV
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