Gene EcDH1_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2563 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2738753 
End bp2739706 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content51% 
IMG OID 
Productflagellar hook-associated protein 3 
Protein accessionACX40199 
Protein GI260449777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000663156 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTCA GTACACAGAT GATGTACCAG CAAAACATGC GTGGTATCAC CAATTCTCAG 
GCAGAATGGA TGAAGTACGG CGAACAGATG TCGACGGGTA AGCGAGTCGT TAACCCTTCT
GACGATCCCA TTGCTGCATC ACAAGCCGTA GTTCTCTCCC AGGCACAGGC GCAAAACAGC
CAGTACACGC TGGCGCGTAC TTTCGCCACT CAAAAAGTGT CACTGGAAGA GAGTGTACTT
AGCCAGGTCA CCACTGCTAT CCAGAATGCT CAGGAAAAAA TTGTCTACGC CAGCAATGGC
ACCTTGAGTG ACGATGACCG GGCCTCGCTG GCTACGGATA TTCAGGGGCT TCGTGACCAG
TTGCTGAATC TGGCAAACAC CACTGACGGT AACGGGCGCT ACATTTTTGC CGGTTATAAA
ACAGAGACTG CGCCGTTTAG CGAAGAGAAA GGGAAATACG TCGGTGGAGC AGAAAGTATT
AAACAACAGG TCGATGCTTC GCGTTCGATG GTGATAGGGC ACACGGGTGA CAAAATTTTC
GACAGTATTA CCAGCAACGC GGTAGCGGAA CCAGACGGTA GCGCTTCTGA AACCAATCTT
TTTGCCATGC TGGATAGTGC CATCGCAGCC CTGAAAACGC CGGTCGCGGA TAGCGAAGCG
GATAAAGAAA CCGCCGCTGC GGCGTTAGAT AAAACCAACC GCGGACTGAA AAACTCGCTG
AACAATGTGC TGACTGTTCG CGCGGAATTA GGCACGCAGC TGAACGAACT GGAGTCGCTG
GATTCATTAG GTAGCGATCG CGCTTTAGGG CAAACGCAGC AGATGAGCGA TCTGGTTGAT
GTGGACTGGA ATGCAACTAT TTCATCTTAC ATCATGCAGC AAACGGCATT GCAGGCATCG
TATAAAGCAT TTACCGATAT GCAGGGATTG TCGCTCTTCC AGCTCAGCAA ATAA
 
Protein sequence
MRFSTQMMYQ QNMRGITNSQ AEWMKYGEQM STGKRVVNPS DDPIAASQAV VLSQAQAQNS 
QYTLARTFAT QKVSLEESVL SQVTTAIQNA QEKIVYASNG TLSDDDRASL ATDIQGLRDQ
LLNLANTTDG NGRYIFAGYK TETAPFSEEK GKYVGGAESI KQQVDASRSM VIGHTGDKIF
DSITSNAVAE PDGSASETNL FAMLDSAIAA LKTPVADSEA DKETAAAALD KTNRGLKNSL
NNVLTVRAEL GTQLNELESL DSLGSDRALG QTQQMSDLVD VDWNATISSY IMQQTALQAS
YKAFTDMQGL SLFQLSK