Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2344 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 2512862 |
End bp | 2514127 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | 4-aminobutyrate aminotransferase |
Protein accession | ACX39987 |
Protein GI | 260449565 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00720647 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACA ATGAATTCCA TCAGCGTCGT CTTTCTGCCA CTCCGCGCGG GGTTGGCGTG ATGTGTAACT TCTTCGCCCA GTCGGCTGAA AACGCCACGC TGAAGGATGT TGAGGGCAAC GAGTACATCG ATTTCGCCGC AGGCATTGCG GTGCTGAATA CCGGACATCG CCACCCTGAT CTGGTCGCGG CGGTGGAGCA GCAACTGCAA CAGTTTACCC ACACCGCGTA TCAGATTGTG CCGTATGAAA GCTACGTCAC CCTGGCGGAG AAAATCAACG CCCTTGCCCC GGTGAGCGGG CAGGCCAAAA CCGCGTTCTT CACCACCGGT GCGGAAGCGG TGGAAAACGC GGTGAAAATT GCTCGCGCCC ATACCGGACG CCCTGGCGTG ATTGCGTTTA GCGGCGGCTT TCACGGTCGT ACGTATATGA CCATGGCGCT GACCGGAAAA GTTGCGCCGT ACAAAATCGG CTTCGGCCCG TTCCCTGGTT CGGTGTATCA CGTACCTTAT CCGTCAGATT TACACGGCAT TTCAACACAG GACTCCCTCG ACGCCATCGA ACGCTTGTTT AAATCAGACA TCGAAGCGAA GCAGGTGGCG GCGATTATTT TCGAACCGGT GCAGGGCGAG GGCGGTTTCA ACGTTGCGCC AAAAGAGCTG GTTGCCGCTA TTCGCCGCCT GTGCGACGAG CACGGTATTG TGATGATTGC TGATGAAGTG CAAAGCGGCT TTGCGCGTAC CGGTAAGCTG TTTGCCATGG ATCATTACGC CGATAAGCCG GATTTAATGA CGATGGCGAA AAGCCTCGCG GGCGGGATGC CGCTTTCGGG CGTGGTCGGT AACGCGAATA TTATGGACGC ACCCGCGCCG GGCGGGCTTG GCGGCACCTA CGCCGGTAAC CCGCTGGCGG TGGCTGCCGC GCACGCGGTG CTCAACATTA TCGACAAAGA ATCACTCTGC GAACGCGCGA ATCAACTGGG CCAGCGTCTC AAAAACACGT TGATTGATGC CAAAGAAAGC GTTCCGGCCA TTGCTGCGGT ACGCGGCCTG GGGTCGATGA TTGCGGTAGA GTTTAACGAT CCGCAAACGG GCGAGCCGTC AGCGGCGATT GCACAGAAAA TCCAGCAACG CGCGCTGGCG CAGGGGCTGC TCCTGCTGAC CTGTGGCGCA TACGGCAACG TGATTCGCTT CCTGTATCCG CTGACCATCC CGGATGCGCA ATTCGATGCG GCAATGAAAA TTTTGCAGGA TGCGCTGAGC GATTAA
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Protein sequence | MSNNEFHQRR LSATPRGVGV MCNFFAQSAE NATLKDVEGN EYIDFAAGIA VLNTGHRHPD LVAAVEQQLQ QFTHTAYQIV PYESYVTLAE KINALAPVSG QAKTAFFTTG AEAVENAVKI ARAHTGRPGV IAFSGGFHGR TYMTMALTGK VAPYKIGFGP FPGSVYHVPY PSDLHGISTQ DSLDAIERLF KSDIEAKQVA AIIFEPVQGE GGFNVAPKEL VAAIRRLCDE HGIVMIADEV QSGFARTGKL FAMDHYADKP DLMTMAKSLA GGMPLSGVVG NANIMDAPAP GGLGGTYAGN PLAVAAAHAV LNIIDKESLC ERANQLGQRL KNTLIDAKES VPAIAAVRGL GSMIAVEFND PQTGEPSAAI AQKIQQRALA QGLLLLTCGA YGNVIRFLYP LTIPDAQFDA AMKILQDALS D
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