| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2035 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 2195600 |
|---|
| End bp | 2196319 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | ACX39692 |
|---|
| Protein GI | 260449270 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00013009 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTA TCGTATTTGT GGAAGATGAT GCGGAAGTCG GTTCACTGAT TGCCGCGTAC
CTGGCAAAAC ATGATATGCA GGTTACCGTA GAGCCGCGCG GCGACCAGGC CGAAGAAACC
ATTTTGCGAG AAAATCCGGA TTTGGTGTTA CTCGACATCA TGCTACCAGG CAAGGACGGC
ATGACCATTT GTCGTGATTT ACGCGCAAAG TGGTCTGGAC CGATTGTTCT TCTAACCTCT
CTCGATAGCG ATATGAACCA CATCCTGGCA CTGGAAATGG GTGCCTGCGA CTATATTCTC
AAAACGACGC CCCCTGCTGT TTTGCTAGCG CGTTTACGTT TGCATTTGCG TCAGAATGAG
CAAGCCACAC TGACCAAAGG TCTTCAGGAA ACGTCTCTGA CTCCCTACAA AGCCCTGCAT
TTCGGCACGT TGACCATCGA TCCCATCAAC CGCGTAGTCA CCCTGGCTAA CACTGAAATC
TCGCTCTCGA CAGCTGATTT CGAATTATTG TGGGAATTAG CTACCCATGC CGGGCAAATC
ATGGACCGCG ATGCATTGCT GAAAAATTTA CGCGGCGTCA GTTATGACGG ACTGGATCGT
AGCGTGGACG TGGCTATTTC GCGGTTAAGA AAAAAACTGC TCGATAACGC CGCAGAACCT
TATCGCATTA AAACTGTGCG TAACAAAGGC TATCTTTTTG CGCCTCATGC ATGGGAATAA
|
|---|
| Protein sequence | MNTIVFVEDD AEVGSLIAAY LAKHDMQVTV EPRGDQAEET ILRENPDLVL LDIMLPGKDG
MTICRDLRAK WSGPIVLLTS LDSDMNHILA LEMGACDYIL KTTPPAVLLA RLRLHLRQNE
QATLTKGLQE TSLTPYKALH FGTLTIDPIN RVVTLANTEI SLSTADFELL WELATHAGQI
MDRDALLKNL RGVSYDGLDR SVDVAISRLR KKLLDNAAEP YRIKTVRNKG YLFAPHAWE
|
|---|
| |