Gene EcDH1_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2002 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2160471 
End bp2161127 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content52% 
IMG OID 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionACX39659 
Protein GI260449237 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000269962 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATA ACGACGAATT GCAGCAAATC GCGCATCTGC GCCGTGAATA CACCAAAGGC 
GGGTTACGCC GCCGCGATCT TCCCGCCGAT CCATTAACCC TTTTTGAACG TTGGCTCTCT
CAGGCTTGTG AAGCCAAACT GGCGGACCCT ACCGCGATGG TGGTCGCTAC CGTGGATGAA
CATGGTCAGC CTTATCAGCG CATCGTTTTA CTCAAACATT ACGACGAAAA AGGCATGGTG
TTTTACACCA ACCTCGGCAG CCGTAAAGCA CATCAAATCG AAAATAATCC GCGCGTTAGC
CTGCTGTTCC CGTGGCATAC CCTTGAGCGC CAGGTGATGG TGATCGGTAA AGCAGAACGA
CTTTCGACTC TCGAAGTGAT GAAATATTTT CATAGCCGCC CGCGTGATAG CCAGATTGGT
GCATGGGTTT CGAAGCAGTC CAGTCGCATT TCTGCCCGCG GTATCCTTGA AAGTAAATTC
CTGGAGCTGA AGCAGAAGTT TCAACAGGGC GAAGTGCCAT TGCCGAGCTT TTGGGGCGGT
TTTCGCGTCA GCCTTGAACA GATTGAGTTC TGGCAGGGTG GTGAGCATCG CCTGCATGAC
CGCTTTTTGT ACCAGCGTGA AAATGATGCG TGGAAGATTG ATCGTCTTGC ACCCTGA
 
Protein sequence
MSDNDELQQI AHLRREYTKG GLRRRDLPAD PLTLFERWLS QACEAKLADP TAMVVATVDE 
HGQPYQRIVL LKHYDEKGMV FYTNLGSRKA HQIENNPRVS LLFPWHTLER QVMVIGKAER
LSTLEVMKYF HSRPRDSQIG AWVSKQSSRI SARGILESKF LELKQKFQQG EVPLPSFWGG
FRVSLEQIEF WQGGEHRLHD RFLYQRENDA WKIDRLAP