Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_0520 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 549083 |
End bp | 550054 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Polyprenyl synthetase |
Protein accession | ACX38208 |
Protein GI | 260447786 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000000996752 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAG AAAAAATCAA TGAGTTAACC GCGCAAGATA TGGCGGGTGT TAATGCGGCA ATCCTTGAGC AGCTTAATTC CGACGTCCAA CTGATCAATC AGTTAGGCTA TTACATCGTC AGCGGCGGCG GTAAACGTAT TCGTCCGATG ATTGCTGTAC TGGCTGCACG AGCTGTTGGC TATGAGGGAA ATGCGCATGT CACCATTGCT GCCCTGATCG AGTTTATCCA CACGGCGACT CTGCTACACG ACGACGTTGT GGATGAATCA GATATGCGCA GGGGTAAAGC TACCGCCAAC GCCGCATTTG GCAATGCCGC CAGCGTGCTG GTAGGCGATT TTATTTATAC CCGCGCTTTC CAGATGATGA CCAGCCTCGG TTCGCTCAAA GTGCTGGAAG TCATGTCAGA AGCCGTAAAC GTCATCGCAG AAGGTGAAGT TCTGCAACTG ATGAACGTTA ACGATCCGGA CATCACTGAA GAAAACTACA TGCGCGTTAT CTATAGCAAA ACCGCGCGTC TGTTTGAGGC TGCCGCGCAG TGTTCCGGGA TTCTGGCTGG CTGTACGCCG GAGGAGGAGA AAGGCCTGCA GGATTATGGG CGCTATCTCG GCACTGCTTT CCAGTTGATC GACGATTTAC TCGATTACAA TGCCGATGGC GAACAGTTAG GTAAAAATGT CGGCGACGAT CTGAACGAAG GTAAACCGAC GCTGCCGCTG CTGCATGCGA TGCATCATGG CACACCAGAA CAGGCACAGA TGATCCGTAC CGCCATCGAA CAGGGTAACG GTCGCCATCT TCTGGAACCG GTTCTGGAAG CAATGAACGC TTGTGGATCT CTTGAATGGA CGCGTCAGCG TGCCGAGGAA GAAGCAGACA AAGCCATCGC AGCGTTACAG GTGCTCCCGG ACACCCCTTG GCGAGAAGCA CTCATCGGCC TCGCGCACAT CGCTGTTCAA CGCGATCGTT AA
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Protein sequence | MNLEKINELT AQDMAGVNAA ILEQLNSDVQ LINQLGYYIV SGGGKRIRPM IAVLAARAVG YEGNAHVTIA ALIEFIHTAT LLHDDVVDES DMRRGKATAN AAFGNAASVL VGDFIYTRAF QMMTSLGSLK VLEVMSEAVN VIAEGEVLQL MNVNDPDITE ENYMRVIYSK TARLFEAAAQ CSGILAGCTP EEEKGLQDYG RYLGTAFQLI DDLLDYNADG EQLGKNVGDD LNEGKPTLPL LHAMHHGTPE QAQMIRTAIE QGNGRHLLEP VLEAMNACGS LEWTRQRAEE EADKAIAALQ VLPDTPWREA LIGLAHIAVQ RDR
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