Gene ECH74115_4646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4646 
Symbol 
ID6970511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4291741 
End bp4292208 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content48% 
IMG OID643388350 
Productpeptidase, A24 (type IV prepilin peptidase) family 
Protein accessionYP_002272778 
Protein GI209398150 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000049764 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.0336249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACTA CCCTTCCCTT TCTAATTTTG TACGCTTGTT TATCAGCCCT ACTTTTTTTC 
TGGGATGCAA AGCATGGCTT GTTACCTGAC AGATTTACGT GCCCGTTACT CTGGTCAGGT
CTTTTGTTCT ATCAAGTTTG TCATCCTGAT GGTTTAGCCG ATGCGTTATG GGGGGCAATT
ATTGGTTACG GCACATTCGC TGTCATTTAC TGGGGGTATC GCATACTGCG CCATAAAGAA
GGATTAGGCT ATGGTGATGT GAAGTTTCTC GCCGCCCTTG GCGCCTGGCA TTCATGGGCC
TTCTTACCAC GACTGGTTTT CCTTGCTGCC TCATTCGCTT GCGGAGCCGT AGTTATTGGT
CTGCTCATGA GAGGAAAAGA ATCATTAAAA AACCCGCTGC CTTTTGGGCC ATTTCTGGCG
GCTGCGGGTT TCGTTATAGG CTGGGATAGT TTGCTGATAG GCCGTTAA
 
Protein sequence
MDTTLPFLIL YACLSALLFF WDAKHGLLPD RFTCPLLWSG LLFYQVCHPD GLADALWGAI 
IGYGTFAVIY WGYRILRHKE GLGYGDVKFL AALGAWHSWA FLPRLVFLAA SFACGAVVIG
LLMRGKESLK NPLPFGPFLA AAGFVIGWDS LLIGR