| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3365 |
|---|
| Symbol | gyrA |
|---|
| ID | 6967442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 3103925 |
|---|
| End bp | 3106552 |
|---|
| Gene Length | 2628 bp |
|---|
| Protein Length | 875 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643387174 |
|---|
| Product | DNA gyrase subunit A |
|---|
| Protein accession | YP_002271637 |
|---|
| Protein GI | 209395953 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.329132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACC TTGCGAGAGA AATTACACCG GTCAACATTG AGGAAGAGCT GAAGAGCTCC
TATCTGGATT ATGCGATGTC GGTCATTGTT GGCCGTGCGC TGCCAGATGT CCGAGATGGC
CTGAAGCCGG TACACCGTCG CGTACTTTAC GCCATGAACG TACTAGGCAA TGACTGGAAC
AAAGCCTATA AAAAATCTGC CCGTGTCGTT GGTGACGTAA TCGGTAAATA CCATCCCCAT
GGTGACTCGG CAGTTTATGA CACGATCGTC CGTATGGCGC AGCCATTCTC GCTGCGTTAC
ATGCTGGTAG ACGGTCAGGG TAACTTCGGT TCCATCGACG GCGACTCTGC GGCGGCAATG
CGTTATACGG AAATCCGTCT GGCGAAAATT GCCCATGAAC TGATGGCCGA TCTCGAAAAA
GAGACGGTCG ATTTCGTTGA TAACTATGAC GGCACGGAAA AAATTCCCGA CGTCATGCCA
ACCAAAATTC CTAACCTGCT GGTGAACGGT TCTTCCGGTA TCGCCGTAGG TATGGCAACC
AACATCCCGC CGCACAACCT GACGGAAGTC ATCAACGGTT GTCTGGCGTA TATCGATGAT
GAAGACATCA GCATTGAAGG GCTGATGGAA CACATCCCGG GGCCGGACTT CCCGACGGCG
GCAATCATTA ACGGTCGTCG CGGTATTGAA GAAGCTTACC GTACCGGTCG CGGCAAGGTA
TATATCCGCG CCCGTGCTGA AGTGGAAGTT GACGCCAAAA CCGGACGTGA AACCATTATC
GTCCACGAAA TTCCGTATCA GGTAAACAAA GCGCGCCTGA TCGAGAAGAT TGCGGAACTG
GTAAAAGAAA AACGCGTGGA AGGCATCAGC GCGCTGCGTG ACGAGTCTGA CAAAGACGGT
ATGCGCATCG TGATTGAAGT GAAACGCGAT GCGGTCGGTG AAGTTGTGCT CAACAACCTC
TACTCCCAGA CCCAGTTGCA GGTTTCTTTC GGTATCAACA TGGTGGCATT GCACCATGGT
CAGCCAAAGA TCATGAACCT GAAAGACATC ATCGCGGCGT TTGTTCGTCA CCGCCGTGAA
GTGGTGACCC GTCGTACTAT TTTCGAACTG CGTAAAGCTC GCGATCGTGC TCATATCCTT
GAAGCATTAG CCGTGGCGCT GGCGAACATC GACCCGATCA TCGAACTGAT CCGTCATGCG
CCGACGCCTG CAGAAGCGAA AACTGCGCTG GTGGCTAATC CGTGGCAGCT GGGCAACGTT
GCCGCGATGC TCGAACGTGC TGGCGACGAT GCTGCGCGTC CGGAATGGCT GGAGCCAGAG
TTCGGCGTGC GTGATGGTCT GTACTACCTG ACCGAACAGC AAGCTCAGGC AATTCTGGAT
CTGCGTTTGC AGAAACTGAC CGGCCTTGAG CACGAAAAAC TGCTCGACGA ATACAAAGAG
CTGCTGGATC AGATCGCGGA ACTGCTGCGT ATTCTTGGTA GCGCCGATCG TCTGATGGAA
GTGATCCGTG AAGAGCTGGA GCTGGTTCGT GAACAGTTCG GTGACAAACG TCGTACTGAA
ATCACCGCCA ACAGCGCAGA CATCAACCTG GAAGATCTGA TCACCCAGGA AGATGTGGTC
GTGACGCTCT CTCACCAGGG CTACGTTAAA TATCAGCCGC TTTCTGAATA CGAAGCGCAG
CGTCGTGGCG GGAAAGGTAA ATCTGCCGCA CGTATTAAAG AAGAAGACTT TATCGACCGA
CTGCTGGTGG CGAACACGCA CGACCATATT CTGTGCTTCT CCAGCCGTGG TCGCGTCTAT
TCGATGAAAG TTTACCAGTT GCCGGAGGCC ACTCGTGGCG CGCGCGGTCG TCCGATCGTC
AACCTGCTGC CGCTGGAGCA GGACGAACGT ATCACCGCGA TCCTGCCGGT GACCGAGTTT
GAAGAAGGCG TGAAAGTCTT CATGGCGACC GCTAACGGTA CTGTGAAGAA AACCGTCCTC
ACCGAGTTCA ACCGTCTGCG TACCGCCGGT AAAGTGGCGA TCAAACTGGT TGAAGGCGAT
GAGCTGATCG GCGTTGACCT GACCAGCGGC GAAGACGAAG TAATGCTGTT CTCCGCCGAA
GGTAAAGTGG TGCGCTTTAA AGAGTCTTCT GTCCGTGCGA TGGGCTGCAA CACCACCGGT
GTTCGCGGTA TTCGTTTAGG CGAAGGTGAT AAAGTCGTCT CTCTGATCGT GCCTCGTGGC
GATGGCGCAA TCCTCACCGC AACGCAGAAC GGTTATGGTA AACGTACCGC AGTGGCGGAA
TACCCGACTA AGTCGCGTGC GACGAAAGGG GTTATCTCCA TCAAGGTTAC CGAACGTAAC
GGTTTAGTTG TTGGCGCGGT ACAGGTAGAT GACTGCGACC AGATCATGAT GATCACCGAT
GCCGGTACGC TGGTACGTAC TCGCGTTTCA GAAATCAGCA TCGTGGGCCG TAACACCCAG
GGCGTGATCC TCATCCGTAC TGCGGAAGAT GAAAACGTAG TGGGTCTGCA ACGTGTTGCT
GAACCGGTTG ACGAGGAAGA TCTGGATACC ATCGACGGCA GTGCCGCGGA AGGGGACGAT
GAAATCGCTC CGGAAGTGGA CGTTGACGAC GAGCCAGAAG AAGAATAA
|
|---|
| Protein sequence | MSDLAREITP VNIEEELKSS YLDYAMSVIV GRALPDVRDG LKPVHRRVLY AMNVLGNDWN
KAYKKSARVV GDVIGKYHPH GDSAVYDTIV RMAQPFSLRY MLVDGQGNFG SIDGDSAAAM
RYTEIRLAKI AHELMADLEK ETVDFVDNYD GTEKIPDVMP TKIPNLLVNG SSGIAVGMAT
NIPPHNLTEV INGCLAYIDD EDISIEGLME HIPGPDFPTA AIINGRRGIE EAYRTGRGKV
YIRARAEVEV DAKTGRETII VHEIPYQVNK ARLIEKIAEL VKEKRVEGIS ALRDESDKDG
MRIVIEVKRD AVGEVVLNNL YSQTQLQVSF GINMVALHHG QPKIMNLKDI IAAFVRHRRE
VVTRRTIFEL RKARDRAHIL EALAVALANI DPIIELIRHA PTPAEAKTAL VANPWQLGNV
AAMLERAGDD AARPEWLEPE FGVRDGLYYL TEQQAQAILD LRLQKLTGLE HEKLLDEYKE
LLDQIAELLR ILGSADRLME VIREELELVR EQFGDKRRTE ITANSADINL EDLITQEDVV
VTLSHQGYVK YQPLSEYEAQ RRGGKGKSAA RIKEEDFIDR LLVANTHDHI LCFSSRGRVY
SMKVYQLPEA TRGARGRPIV NLLPLEQDER ITAILPVTEF EEGVKVFMAT ANGTVKKTVL
TEFNRLRTAG KVAIKLVEGD ELIGVDLTSG EDEVMLFSAE GKVVRFKESS VRAMGCNTTG
VRGIRLGEGD KVVSLIVPRG DGAILTATQN GYGKRTAVAE YPTKSRATKG VISIKVTERN
GLVVGAVQVD DCDQIMMITD AGTLVRTRVS EISIVGRNTQ GVILIRTAED ENVVGLQRVA
EPVDEEDLDT IDGSAAEGDD EIAPEVDVDD EPEEE
|
|---|
| |