| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1090 |
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| Symbol | ompF |
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| ID | 6968818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 1118721 |
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| End bp | 1119809 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643385102 |
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| Product | outer membrane protein F |
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| Protein accession | YP_002269601 |
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| Protein GI | 209397832 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000211589 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.385308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAAGC GCAATATTCT GGCAGTGATC GTCCCTGCTC TGTTAGTAGC AGGTACTGCA
AACGCTGCAG AAATCTATAA CAAAGATGGC AACAAAGTAG ATCTGTACGG TAAAGCTGTC
GGTCTGCATT ATTTCTCCAA GGGTAACGGT GAAAACAGTT ACGGTGGCAA TGGCGACATG
ACCTATGCCC GTCTTGGTTT TAAAGGGGAA ACTCAAATCA ATTCCGATCT GACCGGTTAT
GGTCAGTGGG AATATAACTT CCAGGGTAAC AACTCTGAAG GCGCTGACGC TCAAACTGGT
AACAAAACGC GTCTGGCATT CGCGGGTCTT AAATACGCTG ACGTTGGTTC TTTCGATTAC
GGCCGTAACT ACGGTGTGGT TTATGATGCA CTGGGTTACA CCGATATGCT GCCAGAATTT
GGTGGTGATA CTGCATACAG CGATGACTTC TTCGTTGGTC GTGTTGGCGG CGTTGCTACC
TATCGTAACT CCAACTTCTT TGGTCTGGTT GATGGCCTGA ACTTCGCTGT TCAGTACCTG
GGTAAAAACG AGCGTGACAC TGCACGCCGC TCTAACGGCG ACGGTGTTGG CGGTTCTATC
AGCTACGAAT ACGAAGGCTT TGGTATCGTT GGTGCTTATG GTGCAGCTGA CCGTACCAAC
CTGCAAGAAG CTCAACTTCT TGGCAACGGT AAAAAAGCTG AACAGTGGGC TACTGGTCTG
AAGTATGATG CGAACAACAT CTACCTGGCA GCGAACTACG GTGAAACGCG TAACGCTACG
CCGATCACTA ATAAATTTAC AAACATCAGC GGCTTCGCCA ACAAAACGCA AGACGTTCTG
TTAGTTGCGC AATACCAGTT CGATTTCGGT CTGCGTCCGT CCATCGCTTA CACCAAATCT
AAAGCGAAAG ACGTAGAAGG TATCGGTGAT GTTGATCTGG TGAACTACTT TGAAGTGGGC
GCAACCTACT ACTTCAACAA AAACATGTCC ACCTATGTTG ACTACATCAT CAACCAGATC
GATTCTGACA ACAAACTGGG CGTAGGTTCA GACGACACCG TTGCTGTGGG TATCGTTTAC
CAGTTCTAA
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| Protein sequence | MMKRNILAVI VPALLVAGTA NAAEIYNKDG NKVDLYGKAV GLHYFSKGNG ENSYGGNGDM
TYARLGFKGE TQINSDLTGY GQWEYNFQGN NSEGADAQTG NKTRLAFAGL KYADVGSFDY
GRNYGVVYDA LGYTDMLPEF GGDTAYSDDF FVGRVGGVAT YRNSNFFGLV DGLNFAVQYL
GKNERDTARR SNGDGVGGSI SYEYEGFGIV GAYGAADRTN LQEAQLLGNG KKAEQWATGL
KYDANNIYLA ANYGETRNAT PITNKFTNIS GFANKTQDVL LVAQYQFDFG LRPSIAYTKS
KAKDVEGIGD VDLVNYFEVG ATYYFNKNMS TYVDYIINQI DSDNKLGVGS DDTVAVGIVY
QF
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