| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_0843 |
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| Symbol | tolB |
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| ID | 6971245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 865526 |
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| End bp | 866818 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643384868 |
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| Product | translocation protein TolB |
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| Protein accession | YP_002269374 |
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| Protein GI | 209399861 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000968933 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGG CATTACGAGT AGCATTTGGT TTTCTCATAC TGTGGGCATC AGTTCTGCAT
GCTGAAGTCC GCATTGTGAT CGACAGCGGT GTAGATTCCG GTCGTCCTAT TGGAGTTGTT
CCTTTCCAGT GGGCGGGCCC TGGTGCGGCA CCTGAAGATA TTGGCGGCAT CGTTGCTGCC
GACTTGCGTA ACAGCGGTAA ATTTAATCCG TTAGATCGCG CTCGTCTGCC ACAGCAGCCG
GGTAGTGCGC AGGAAGTACA ACCAGCTGCA TGGTCCGCGC TGGGTATTGA CGCTGTAGTT
GTCGGTCAGG TCACTCCGAA TCCGGATGGT TCTTACAATG TTGCTTATCA ACTTGTTGAC
ACTGGCGGCG CACCGGGTAC TGTACTTGCT CAGAACTCGT ACAAAGTGAA CAAGCAGTGG
CTGCGTTATG CTGGTCATAC CGCCAGTGAT GAAGTGTTTG AAAAACTGAC CGGTATTAAA
GGTGCGTTCC GTACCCGTAT TGCCTACGTT GTTCAGACCA ACGGCGGTCA GTTCCCGTAT
GAACTGCGCG TATCTGACTA TGACGGTTAC AACCAGTTTG TCGTTCACCG TTCACCACAG
CCGCTGATGT CCCCGGCGTG GTCACCAGAC GGTTCTAAAC TGGCTTATGT GACCTTCGAA
AGCGGTCGTT CCGCGCTGGT TATACAAACG CTGGCAAACG GCGCTGTACG TCAGGTGGCT
TCATTCCCGC GTCACAACGG TGCGCCTGCA TTCTCGCCAG ACGGCAGCAA ACTGGCATTC
GCCTTGTCGA AAACCGGTAG CCTGAACCTG TACGTAATGG ATTTGGCTTC TGGTCAGATC
CGCCAGGTGA CTGATGGTCG CAGTAACAAT ACCGAACCGA CCTGGTTCCC GGACAGCCAG
AACCTGGCAT TTACTTCTGA CCAGGCCGGT CGTCCACAGG TTTATAAAGT GAATATCAAC
GGCGGTGCGC CACAACGTAT TACCTGGGAA GGTTCGCAGA ACCAGGATGC GGATGTCAGC
AGCGACGGTA AATTTATGGT AATGGTCAGC TCCAATGGTG GGCAGCAGCA CATTGCCAAA
CAAGATCTGG CAACGGGAGG CGTACAAGTT CTGTCGTCCA CGTTCCTGGA TGAAACGCCA
AGTCTGGCAC CTAACGGCAC TATGGTAATC TACAGCTCTT CTCAGGGGAT GGGATCCGTG
CTGAATTTGG TTTCTACAGA TGGGCGTTTC AAAGCGCGTC TTCCGGCAAC TGATGGACAG
GTCAAATTCC CTGCCTGGTC GCCGTATCTG TGA
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| Protein sequence | MKQALRVAFG FLILWASVLH AEVRIVIDSG VDSGRPIGVV PFQWAGPGAA PEDIGGIVAA
DLRNSGKFNP LDRARLPQQP GSAQEVQPAA WSALGIDAVV VGQVTPNPDG SYNVAYQLVD
TGGAPGTVLA QNSYKVNKQW LRYAGHTASD EVFEKLTGIK GAFRTRIAYV VQTNGGQFPY
ELRVSDYDGY NQFVVHRSPQ PLMSPAWSPD GSKLAYVTFE SGRSALVIQT LANGAVRQVA
SFPRHNGAPA FSPDGSKLAF ALSKTGSLNL YVMDLASGQI RQVTDGRSNN TEPTWFPDSQ
NLAFTSDQAG RPQVYKVNIN GGAPQRITWE GSQNQDADVS SDGKFMVMVS SNGGQQHIAK
QDLATGGVQV LSSTFLDETP SLAPNGTMVI YSSSQGMGSV LNLVSTDGRF KARLPATDGQ
VKFPAWSPYL
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