Gene ECH74115_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_0240 
Symbol 
ID6969827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp255990 
End bp256514 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content52% 
IMG OID643384311 
Producttype VI secretion lipoprotein, VC_A0113 family 
Protein accessionYP_002268827 
Protein GI209399492 
COG category[S] Function unknown 
COG ID[COG3521] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGGA AGGCGTTTCT GGCCTGCGTG CTGATGTGCG TCATATTAAC CGGCTGCGAA 
ACGGCGAAAA AAATCAGCGA GGTGATCAAA AACCCGGATA TCCAGGTCGG GAGCCTGAAG
GAGCAACCTT CGGAAATAAC CGTCACCCTG CTGACTGAAC CGGACACCAA TACCAATGCG
GAGGGTGAAT CAGCCGCCGT GGATGTGCAA CTGGTGTACC TGACTGACGA CTCAAAATTG
CAGGCAGCCG ACTATGACCA GATAGCCAGT ACGCCGCTAC CGGATGTGCT GGGTAAAAAC
TATATCGACC ACCAGGATTT CAACCTGTTG CCGGACACCA TCAAAACCCT GCCGCCGATA
AAGCTGGATG AGAAAACGCA GTTTATTGGT GTCGTGGCCT ATTTCTCCGA TGACCAGGCC
ACTGAATGGA AACAAATCGA GACGGTGGAA GGAACCGGCC ACCATTACCG CCTGCTGGTG
CATGTACGTC AAAGCAGCAT CGAAATGAAA AAAGAGGATG AATAA
 
Protein sequence
MNRKAFLACV LMCVILTGCE TAKKISEVIK NPDIQVGSLK EQPSEITVTL LTEPDTNTNA 
EGESAAVDVQ LVYLTDDSKL QAADYDQIAS TPLPDVLGKN YIDHQDFNLL PDTIKTLPPI
KLDEKTQFIG VVAYFSDDQA TEWKQIETVE GTGHHYRLLV HVRQSSIEMK KEDE