| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2279 |
|---|
| Symbol | |
|---|
| ID | 4663515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 2655278 |
|---|
| End bp | 2656414 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639820525 |
|---|
| Product | HflK protein |
|---|
| Protein accession | YP_967722 |
|---|
| Protein GI | 120603322 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01933] HflK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAC TGCCCTATTT TTTCAGTATT ATGAACTGGG ATTGGGACAA ACTGCAAGAA
AAACGGCAGC GGCAGACGGG CGGCTGGGGT GGCGGCGACC AAGGCGATAC GCCTCCGCCC
TCCGGGCCGG ACTTCGAGAA GCTTGGCGAT TCGTTCCGCC GCTTCCGCGA ATTCCCGTTT
CCTACCGGCA AACTTGCCGC AGCGGCTGTG GCCGTCCTGT GGCTTCTTTC CGGTGTCTAC
ATCATCAACC CCGACGAAGC AGGGGTGGTG CTCCGGTTCG GACAGTACGA CCGTACTGTC
GGCCCCGGCC CGCACTACCA CCTGCCCTTC CCTGTTGAAC GGGTCTACAA GCCCAAGGTG
ACGCAGGTGC AACGGGTGGA GATAGGATTC CGCTCGCCGG CGCAGGGCGC CACCTTCCAG
CAGGGACAGG GACGCGTCTT CCCCGAAGAG GCCGCCATGC TGACCGGTGA CGAGAACATC
GTCAACGTGC AGTTCAGCGT GCAGTATCAG ATCAAGGACC CTGTGGAGTA CCTCTTCAAC
GTCACCGACC AGGCGGCCGT AGTCCGCAAT GCCGCAGAGG CGGCCATGCG CGAGATCATC
GGCAACAGCC TCATCGACGC GGCACTCACT GACGGCAAGC TTCGTATCCA GAACGAAACG
ACGACGCTGC TTCAGGAGAT TCTCGACCGA TACAAGGTTG GCATCCGCGT GCTCGCAGTT
CAGATGCAGG ACGTGCACCC GCCCAAGGAG GTCATCGACG CCTTCAAGGA TGTCGCCTCC
GCCCGCGAGG ACAAGAGCCG CATCGTCAAC GAGGCCGAAG CCTACCGCAA CGAACTCCTG
CCCCGCACCC GTGGCGCGGC GGCTGAACTC GTCAACCAGG CCGAAGGCTA CCGAGAGACC
CGCACCCGAC AGGCCGAAGG CGAGGCCCAA CGCTTCATCG CCGTGCTCAA GGAATACAAC
GCGGCCAAGG ACGTGACGCG CAAGCGCCTG TACTTCGAGA CCATGCAGGA GATTCTCTCG
CGCAACGGCG TCGAGCGCAT CATCCTGCCT CGCGAGACCG CAGGCCGTGT CCTGCCCTAT
CTGCCGCTGG ACAGACTCAC ACCCGCGCCA CAGACCGGTA CGAAGGGAGG CAACTAG
|
|---|
| Protein sequence | MQQLPYFFSI MNWDWDKLQE KRQRQTGGWG GGDQGDTPPP SGPDFEKLGD SFRRFREFPF
PTGKLAAAAV AVLWLLSGVY IINPDEAGVV LRFGQYDRTV GPGPHYHLPF PVERVYKPKV
TQVQRVEIGF RSPAQGATFQ QGQGRVFPEE AAMLTGDENI VNVQFSVQYQ IKDPVEYLFN
VTDQAAVVRN AAEAAMREII GNSLIDAALT DGKLRIQNET TTLLQEILDR YKVGIRVLAV
QMQDVHPPKE VIDAFKDVAS AREDKSRIVN EAEAYRNELL PRTRGAAAEL VNQAEGYRET
RTRQAEGEAQ RFIAVLKEYN AAKDVTRKRL YFETMQEILS RNGVERIILP RETAGRVLPY
LPLDRLTPAP QTGTKGGN
|
|---|
| |