| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1764 |
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| Symbol | rplD |
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| ID | 4663359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 2062814 |
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| End bp | 2063434 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639820004 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_967208 |
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| Protein GI | 120602808 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00135584 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.669415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGTGG TTAAAGTATA CGATCAGAAC AAGCAGGAAG CCGGAGAAAT CACCCTGGCT
CCCGAAGTGT TCGAAGTCGA GGTGAGGCCT GAGATTCTGC ACCTCGTCGT GCGCGCGCAG
CGTGCCGCCT TCCGTGCCGG CACCCATGCC ACCAAGACCC GTGCCTTCGT CTCCGGCGGT
GGCCTCAAGC CTTGGCGCCA GAAGGGCACC GGTCGTGCCC GTGCTGGCTC CATCCGTTCG
CCCCTTTGGC GCGGTGGTGC CATCATCTTC GGCCCCCAGC CGCGCGACTA CGAGTTCAAG
GTCAACAAGA AGGTGCGCAA GCTCGCTCTT CGCATGGCCC TCAGCTCGCG TCTGGCCGGC
AGCAACCTGC TTGTTGTCAA GGGGTTCGAA CTGCCCGAAG TCAAGACCAA GCTGTTTGCC
AAGATTGCTG ACACGCTCGG CCTCGACAAG GCGCTGATCA TCGCCCCCGA AGAAAACACG
ACGCTGGCCC TGTCTGTCCG CAACATCCCC GGGATCACCA TCGCCACCCC TGAACAGCTC
AGTGTGTACG AGATTCTCAA GCACAAGCAG CTCGTTCTCG TGGAAGGTGC CGTGGCCTCC
GTTCAGGACA GGCTCAAGTA A
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| Protein sequence | MAVVKVYDQN KQEAGEITLA PEVFEVEVRP EILHLVVRAQ RAAFRAGTHA TKTRAFVSGG
GLKPWRQKGT GRARAGSIRS PLWRGGAIIF GPQPRDYEFK VNKKVRKLAL RMALSSRLAG
SNLLVVKGFE LPEVKTKLFA KIADTLGLDK ALIIAPEENT TLALSVRNIP GITIATPEQL
SVYEILKHKQ LVLVEGAVAS VQDRLK
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