Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_0028 |
Symbol | aspS |
ID | 4664719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 42715 |
End bp | 44547 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639818221 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_965479 |
Protein GI | 120601079 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.607813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC AGATTGCCGA CATCCAGCTG GAACATCAGC AGTACGTCGC CCCGCTGGGC GACTGGCAGC GCACCCACTC GTGCTGTGAA CTCACCGCCG CAGACGTGGG CAACGACGTG TGCATCATGG GATGGGTGCA GTACCGCCGC GACCACGGCG GGCTCATCTT CGTCGACCTG CGCGACCGCA AGGGCCTGAC GCAGGTCGTC TTCAGCCCCG ACTTCGCGCC CGAGGCCCAC AAGGACGCCC ACATCGTACG CAGCGAATAC GTTCTCGCCA TCCGCGGGCG CGTTCGTCCC CGTCCCGAGG GCATGACCAA CCCGGGCATG AAGACCGGCG AGATTGAAGT GGTTGTCAGC GAATGGAAGC TGCTCAACAC CTCCAAGACC CCCCCCTTCC TCATCGAAGA CCGCACCGAA GCCAGCGAGA ACCTGCGTCT TGCGTGGCGG TATCTCGACC TGCGCCGTCC GCGCATGGCC CGCAACTTCA TGCTGCGTCA CCGCGCCGCA CAGTCGGCAC GTCGCTACCT CGACGAACTC GATTTCCTCG AGATAGAGAC GCCGTACCTC ACCAAGGCCA CGCCCGAAGG TGCGCGCGAC TTCCTCGTGC CCAGCCGCCT GAACCACGGC ATGTTCTACG CCCTGCCGCA GTCGCCCCAG ATTTTCAAGC AGCTGCTCAT GGTCTCCGGC ATGGACAGGT ACTACCAGAT CGTGCGCTGC TTCCGTGACG AGGACATGCG CGCCGACCGC CAGCTCGAGT TCACCCAGAT AGACATCGAG ATGAGCTTCG TCGACGAGGA GCGCGTCATG TCCATGGCCG AGGGTCTCAT GACCCGCGTC ATGAAGGACA CGCTGGGCGT GGATGTCACG CTGCCCTTCC CGCGCATGAC CTATGATCAG GCCATGGGCG AGTACGGCGT CGACAAGCCC GACACCCGTT TCGACCTGCG CCTCAAGGAC GTCACCGACG CCGTGCGCGG GTCCGAGTTC AAGCTCTTCG CCAAGGCACC GCTGGTCAAG GCCATGCGTG TTCCCGGTGG CGAGACCATG ACCCGCAAGG AGATAGACGA GTTCACCGAA TTCGTGAAGA TCTATGGCGC ACAGGGTCTT GCATGGATCA AGATCCGCGA AGGCGAATGG CAGTCGCCCA TCGCCAAGTT CCTGTCCGAG ACGGAACGCG CCGCGCTCGT GGCCGCCCTC GGCCTTGAAG TGGGCGACAT CGTCTTCTTC CAGGCTGGCG AACCGGGCAT GGTCAACGCC GCGCTCGGCA ACCTGCGCGT GAAGCTCGGC CAGCACCTCG GCCTCATCCC CGAAGACACC TACAACTTCC TGTGGGTGAC CGACTTCCCG CTGTTCGAAT ACGACGAGGA GGAGAAGCGG TACGTGGCAT GCCACCACCC CTTCACCTCG CCCAAGGACG GCCATTTCGA CCTCATGACC AGCGACCCGG CGGCAGCCCG CGCCCGTGCG TATGACATGG TGCTCAACGG TTACGAGTTG GGCGGCGGTT CCATCCGCAT CCACTCCGCC GAAGTGCAGC GCCGCATGTT CGCCGCACTG GGCCTCGACC CGCAGGAGGC TGAAGAGAAG TTCGGCTTCC TCATTCAGGC CCTCGAACAT GGCGCACCGC CCCATGGCGG CATCGCCTTC GGCATGGACC GTCTGGTGAT GCTCCTCACC GGTTCGCCCT CCATCCGCGA CGTCATCGCC TTCCCGAAGA CGCAGAAGGC GACCTGTCTC ATGACGCAGG CACCCGACGC CGTGAGTGCG CGCCAGTTGC GCGACCTCGG CATCCGCCTG CGCGAGACAC CGCAGGAACA GAAGCCCGAA TAG
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Protein sequence | MSDQIADIQL EHQQYVAPLG DWQRTHSCCE LTAADVGNDV CIMGWVQYRR DHGGLIFVDL RDRKGLTQVV FSPDFAPEAH KDAHIVRSEY VLAIRGRVRP RPEGMTNPGM KTGEIEVVVS EWKLLNTSKT PPFLIEDRTE ASENLRLAWR YLDLRRPRMA RNFMLRHRAA QSARRYLDEL DFLEIETPYL TKATPEGARD FLVPSRLNHG MFYALPQSPQ IFKQLLMVSG MDRYYQIVRC FRDEDMRADR QLEFTQIDIE MSFVDEERVM SMAEGLMTRV MKDTLGVDVT LPFPRMTYDQ AMGEYGVDKP DTRFDLRLKD VTDAVRGSEF KLFAKAPLVK AMRVPGGETM TRKEIDEFTE FVKIYGAQGL AWIKIREGEW QSPIAKFLSE TERAALVAAL GLEVGDIVFF QAGEPGMVNA ALGNLRVKLG QHLGLIPEDT YNFLWVTDFP LFEYDEEEKR YVACHHPFTS PKDGHFDLMT SDPAAARARA YDMVLNGYEL GGGSIRIHSA EVQRRMFAAL GLDPQEAEEK FGFLIQALEH GAPPHGGIAF GMDRLVMLLT GSPSIRDVIA FPKTQKATCL MTQAPDAVSA RQLRDLGIRL RETPQEQKPE
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