Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1250 |
Symbol | |
ID | 7173153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 1545595 |
End bp | 1546176 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643539758 |
Product | Cupin 2 conserved barrel domain protein |
Protein accession | YP_002435668 |
Protein GI | 218886347 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.00015051 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCACAT CTACCATCTT CCGCCCCGGC AGCGCCTGCT TCCCCGGCCT CGTCGACCAT ACCTCCAGGC TGCCGGCCTG CCGACTGGTG CCATCCGGTT TGCTGGCCGC CCTGGCACTG TGCGTCATCA CGCTGTCAGG CGGTTGTGCG GCCCGGCACG CGAGCACGCC CGCCGCCCTC CAGACCGCCG ACCAGACCTC CGGTCAGTCC GCCCTCCAGC CCTCTTCGCA GGCCGTCAGT TCCGTCCAGC TCGTCCAGTC GGATCGCAGC TGGGATGGCT CCACGCTGCC CGCGTATCCG CAGGGCCAGC CACAGGTCAC CATCCTGCGC ATCACCATTC CCGCCGGGGC GCGGCTGCCC CTGCATCATC ACCCGGTGAT CAACGCCGGG GTGCTTACAC GCGGCCAGTT GCTGGTCACC ACGGAGGACG GCAAGGAACT GCGCCTCGCG GCGGGCGACC CCATCGTGGA GGTGGTGAAC AACCCGCACC AGGGCTTCAA CCCCGGCAGC GAACCCGCCG AAATCATCGT CTTCTACGCC GGGCAGGCGG GCACTCCGCT GGCCGTCAAG CAGGGGCAGT AG
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Protein sequence | MRTSTIFRPG SACFPGLVDH TSRLPACRLV PSGLLAALAL CVITLSGGCA ARHASTPAAL QTADQTSGQS ALQPSSQAVS SVQLVQSDRS WDGSTLPAYP QGQPQVTILR ITIPAGARLP LHHHPVINAG VLTRGQLLVT TEDGKELRLA AGDPIVEVVN NPHQGFNPGS EPAEIIVFYA GQAGTPLAVK QGQ
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