Gene DvMF_0094 details

Gene Information

• Locus tag: DvMF_0094
• Symbol: rplF
• ID: 7171968
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 107729
• End bp: 108265
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643538587
• Product: 50S ribosomal protein L6
• Protein accession: YP_002434523
• Protein GI: 218885202
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 64
• Fosmid unclonability p-value: 0.0429315
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGCGAA TCGGTAAACT CCCCATCGCC ATTCCTTCCG GCGTTGAAGT GAAGGTCGGG 
ACCGAAGCCG TCGAGGTCAA GGGCCCGAAG GGCGTGCTTG TCACCCCTAC CCATACGGAA 
CTGAACTACG CGGTTGAGGA CGGCCATGTC GTCATCACCC GCGCCACCGA AACCCGCACT 
GCGCGTGCCC AGCACGGCCT GCGTCGCACC CTGCTTGCCA ACTGCATCCA GGGCGTGACC 
AAGGGCTTTT CCAAGACCCT GGAAGTCATC GGCGTCGGCT ACAAGGTTGC CGTCAAGGGC 
AACCTGGTGG AACTTGCGGT CGGTTTCTCG CACCCGGTGA TCATGGAAAT GCCCGAAGGC 
GTCGAAGCCA AGGTGGAAGG CCAGAAGCTG ACCATCTCGG GCACCAGCAA AGAAGTGGTC 
GGCGAGATCG CCGCACGCAT CCGTCGCGTG CGTAAGCCTG AACCCTACAA GGGCAAGGGC 
ATCAAGTACG ACAACGAGCA GATTCGCCGC AAGGCCGGCA AGTCTGGTGG CAAATAG 

 

Protein sequence

MSRIGKLPIA IPSGVEVKVG TEAVEVKGPK GVLVTPTHTE LNYAVEDGHV VITRATETRT 
ARAQHGLRRT LLANCIQGVT KGFSKTLEVI GVGYKVAVKG NLVELAVGFS HPVIMEMPEG 
VEAKVEGQKL TISGTSKEVV GEIAARIRRV RKPEPYKGKG IKYDNEQIRR KAGKSGGK