Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0085 |
Symbol | rpsC |
ID | 7171959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 104347 |
End bp | 104988 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643538578 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_002434514 |
Protein GI | 218885193 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.0561951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAGA AAGTACATCC TTACGGCTTC CGGTTGGGGT ACAATAAGAA CTGGCAGTCG CGCTGGTTCA GCAAGAAGGA ATACCCCGGC TTCGTCTTCG AGGATCACAA CATCCGCAAG TTCGTGAAGA AGACGCTGTA CCACGCCGGT CTTTCCAAGA TCGAGATCGA GCGTGCCGGC GGCAAGGTGC GGCTGATCCT CTCCACCGCG CGTCCGGGCA TTGTCATCGG CCGCAAGGGC GTGGAAATCG AAAAACTCCG TGGCGACCTG CGCAAGAAGT TCAAGCGCGA GTTCTCCATT GAGGTGAACG AAATCCGCCG CCCCGAAGTG GAAGCCCAGC TCGTTGCCGA AAACATCGCG CTGCAGCTTG AACGCCGTGT GGCTTTCCGT CGCGCCATGA AGCGCACGGT GTCCATGTCG CGCAAGTTTG GCGCCGAAGG CATCAAGGTG ACCTGTTCCG GCCGCCTCGC CGGGGCCGAA ATCGCCCGTA CCGAATGGTA CCGCGATGGT CGCGTGCCCC TGCAGACCCT GCGTGCCGAC ATCGACTTCG GTTTTGCCGA GGCCCGTACC ACCTACGGGG TGATCGGCGT CAAGGTCTGG ATTTTCAAGG GTGAAATTCT GGACAACGAG GTAGAACAGT AA
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Protein sequence | MGQKVHPYGF RLGYNKNWQS RWFSKKEYPG FVFEDHNIRK FVKKTLYHAG LSKIEIERAG GKVRLILSTA RPGIVIGRKG VEIEKLRGDL RKKFKREFSI EVNEIRRPEV EAQLVAENIA LQLERRVAFR RAMKRTVSMS RKFGAEGIKV TCSGRLAGAE IARTEWYRDG RVPLQTLRAD IDFGFAEART TYGVIGVKVW IFKGEILDNE VEQ
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