Gene DvMF_0079 details

Gene Information

• Locus tag: DvMF_0079
• Symbol: rplC
• ID: 7171953
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 101297
• End bp: 101926
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643538572
• Product: 50S ribosomal protein L3
• Protein accession: YP_002434508
• Protein GI: 218885187
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 69
• Fosmid unclonability p-value: 0.145283
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTGAGA AATTGGGTAT CCTGGGTCGC AAGGTCGGCA TGACCCGCAT TTTCGCCAGT 
GATGGTTCCG CCGTGGCTGT TACGGTCATC CAGGCCGGTC CCTGTCCGGT CATCCAGGTT 
CGCAACGGCG AGACCGACGG CTACGACGCC GTGCAGATCG CCTTCGAGGA AGCCAAGGAA 
AAGCACGTGA CCAAGCCCGC CCGTGGCCAC TTCGCCAAGG CCGGCAAGGG TCTTTTCCGC 
AACCTCCGCG AAATTCGCCT GGAGGCGCCT GCCGAATTCG AAGTCGGCCA GGAACTCACC 
GTGTCCCTGT TCGCCGCTGG CGAAAAGGTG AAGGTGACCG GTACCAGCAT AGGCAAGGGG 
TACCAGGGCG TCATGCGCCG CTGGAACTTC GCCGGCTCCA AGGACACGCA CGGCTGCGAA 
AAGGTGCATC GTTCCGGTGG CTCCATCGGT AACAACACCT TCCCGGGTCA CGTGTTCAAG 
GGCAAGAAGA TGGCTGGCCA CTGGGGTGAC GAGCGCGTGA CGGTCAAGAA TCTCGAGATC 
GTCGACATCC GCGCCGAAGA CAACGTCATT CTGGTGAAGG GTGCCGTTCC CGGCCCCAAG 
AACGGCCTGG TCCTGGTGCG CAAGCAGTAA 

 

Protein sequence

MAEKLGILGR KVGMTRIFAS DGSAVAVTVI QAGPCPVIQV RNGETDGYDA VQIAFEEAKE 
KHVTKPARGH FAKAGKGLFR NLREIRLEAP AEFEVGQELT VSLFAAGEKV KVTGTSIGKG 
YQGVMRRWNF AGSKDTHGCE KVHRSGGSIG NNTFPGHVFK GKKMAGHWGD ERVTVKNLEI 
VDIRAEDNVI LVKGAVPGPK NGLVLVRKQ