| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0069 |
|---|
| Symbol | |
|---|
| ID | 7171943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 88750 |
|---|
| End bp | 90360 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643538562 |
|---|
| Product | reductase, iron-sulfur binding subunit, putative |
|---|
| Protein accession | YP_002434498 |
|---|
| Protein GI | 218885177 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 0.481368 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAC TGCCAACTCC CGACAAGCTG ATCGCGACCA TCCCCGCCTT CCCCATGGAA
GGGTGGATGG ACACCAAGCC GGACTTCAAG CCCGGCACGT GGTGCTATCC GGCCAAGGTC
GACAACATGA AGGCGCTCGG CATGCCGAAC CCGCACGAAT GGTCGGCCGA CCAGGAAGAC
TGGAACCTGC CGGAAAACTG GGAAGAGATC ATCTACGAAG GCCTCAAGTC GCGCCTGGCC
AAGCACCGCT CGCTCAAGGT GTTCATGGAC ATCTGCGTGC GCTGCGGCGC CTGCGCCGAC
AAGTGTCACT TCTTCATCGG CACGGGCGAC CCCAAGAACA TGCCCGTGCT GCGCGCCGAG
TTGCTGCGCT CGGTGTACCG CCGCGACTTC ACCACGGCGG GCAAGCTGCT GGGCAAGCTG
GCAGGCGCCC GCAAGCTGGA CAAGGATGTC ATCAAGGAGT GGTTCTACTA CTTCTACCAG
TGCACCGAAT GCCGCCGCTG CTCGCTGTTC TGCCCCTACG GCATCGACAC CGCGGAGATC
ACCGCCATCG CGCGTGAGCT GTTGCACGAG TTGGGCCTTG GCATCCACTG GATCATGGAG
CCGGTGTTCA ACTGCAACCG CACCGGCAAC CACCTGGGTA TCCAGCCGCA CGCCTTCAAG
GAAATCGTCG AGTTCCTCTG CGAGGACATC GAGACGGTGA CCGGCATCAA GATCAACCCG
CCCTTCAACG AAAAGGGCCA CGAGATCGTG TTCATCACGC CCTCTGGTGA CGTGTTCGCC
GACCCCGGCA TCTACACGTT CATGGGCTAC CTGATGCTGT TCCACGAAAT CGGGCTGGAC
TACACCCTGT CCACCTACGC CTCGGAAGGC GGCAACTTCG GCTCGTTCAC CACCTTCGAC
ATGGCGAAGA AGCTGAACGC CAAGATGTAC GCCGAAGCCG AGCGCCTTGG CTCCAAGTGG
ATCCTGGGTG GCGAATGCGG TCACATGTGG CGCGTGGTGC ACCAGTACAT GGACACCTTC
AACGGCCCCA CCCCGCCCAA GATGGAAGTG CCCAGGTCGC CCATCACCGG CACGGTGTTC
AAGAACGCGG CGTCCACCAA GATGGTGCAC ATCGCCGAGT TCACGGCCGA CCTCATCAAG
CACAACAAGC TGCGCCTCGA CCCCAGCCGC AACGACCACC TGACCGTGAC CTTCCACGAC
TCGTGCAACC CGGCGCGCGG CATGGGCCTG CTGGACGAAC CCCGCTACGT GCTCCAGAAC
GTGTGCAACA ACTACGTGGA CATGCCCGAG AACACCATCC GCGAGCAGAC CTTCTGCTGC
GGCGGCGGTT CCGGCCTGAA CACCGACGAA ATCATGGAAA TCCGCATGCG CGGCGGCCTG
CCCCGTGGCA ATGCCCTGCG GTACGTGCAG CAGAAGCACG GCGTGAACAC CATGGCCTGC
ATCTGCGCCA TCGACCGGGC CACCCTGCCC CCGCTGGCCA ACTACTGGGC CCCCGGCGTC
ACGGTCTACG GTACCCACGA GCTGGTGGCC AACGCCCTCG TGATGCGCGG CGAACAGAAG
CGCACCATGG ACCTGCGGCA GGAAGAACTG CCCGGTATGG AGGATGAATA A
|
|---|
| Protein sequence | MSKLPTPDKL IATIPAFPME GWMDTKPDFK PGTWCYPAKV DNMKALGMPN PHEWSADQED
WNLPENWEEI IYEGLKSRLA KHRSLKVFMD ICVRCGACAD KCHFFIGTGD PKNMPVLRAE
LLRSVYRRDF TTAGKLLGKL AGARKLDKDV IKEWFYYFYQ CTECRRCSLF CPYGIDTAEI
TAIARELLHE LGLGIHWIME PVFNCNRTGN HLGIQPHAFK EIVEFLCEDI ETVTGIKINP
PFNEKGHEIV FITPSGDVFA DPGIYTFMGY LMLFHEIGLD YTLSTYASEG GNFGSFTTFD
MAKKLNAKMY AEAERLGSKW ILGGECGHMW RVVHQYMDTF NGPTPPKMEV PRSPITGTVF
KNAASTKMVH IAEFTADLIK HNKLRLDPSR NDHLTVTFHD SCNPARGMGL LDEPRYVLQN
VCNNYVDMPE NTIREQTFCC GGGSGLNTDE IMEIRMRGGL PRGNALRYVQ QKHGVNTMAC
ICAIDRATLP PLANYWAPGV TVYGTHELVA NALVMRGEQK RTMDLRQEEL PGMEDE
|
|---|
| |