| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0036 |
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| Symbol | |
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| ID | 7171908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 46313 |
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| End bp | 49459 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643538527 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002434465 |
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| Protein GI | 218885144 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCCA AATTCTTCAT CGACCGCCCC ATCCTCTCCA ACGTCATCGG CATCGTGCTG
GTTCTCATCG GCGTCGTGTC GCTGATCATG CTGCCCATTT CGCAGTACCC GGACATCACC
CCGCCCACGG TGGAGGTGAA GGCCATCTAC CCCGGCTCCA ACTCGCTGGT GCTTGCCGAC
GTGGTGGGCG CGCCCATAGA GCAGGAGGTA AACGGCGTGG AGGACATGCT GTACATGTCC
TCCAAAAGCG CCAACGACGG CACCTACACG CTCACCATCA CCTTCGCGCT GGGCACCGAC
ATCGACATGG CTACGGTGCT GGTCCAGAAC CGCGTCAACG TGGCCATGGC CCGCCTGCCC
GACGAGGTGA AGCGCCAGGG CGTGACGGTG AAGAAGAAGT CCACCGCCAT CCTCCAGGTG
GTCACGCTTA CCTCTCCCGA TGGCAGCTAC GACGACCTGT TCCTGAGCAA CTTCGCTTCA
TTGCGCGTGC GTGATGATCT GGCGCGCATC CCCGGCGTGG GCGAGGCCAT GGTGTTCGGC
GCGGCCAGTT ATTCCATGCG CGTGTGGCTG GACGCCCCGC GCCTGAAAAG CCTGGGCCTG
ACCACCAGGG ACGTGCTCAA CGCCATCAGC GAGCAGAACG TGCAGGTGGC CGCCGGCCAG
ATCGGAGCGC AGCCCGCGCC GGACACCCAG AACTTCCAGT TTACCGTGCA GACGCAGGGG
CGGCTTTCCG AGGTTTCGGA ATTCGAGGAC ATCATCATCC GCACCGCCAC GGGCGGCCCC
ACCGGGCGCA CCGTCCGGGT GCGGGACGTG GCCCGGGTGG AACTGGGCGG CCAGACCTAC
GACCTGTACG CCCAGAAGAA CGGCAAACCC GCCTCGCTGG TGATCATCTA CCAGTTGCCG
GGGGCCAACG CGCTGGACGT GGCGCAGAAG GTCACCGCCA CCATGCAGCG CATCGGCAAG
GACTTTCCGG CCGGCGTGGC TTGGGACATT CCCTACGACA CCACCCGCTT CGTCGAGGCG
GCCATCGAGC AGGTGTACCA CACCCTGTTC GAGGCAGCCG TGCTGGTGCT GGCGGTGATC
CTGATCTTCC TGCAGGACTG GCGGGCCACG CTGGTGCCCG CCACGGTGGT GCCCATCACC
ATCCTGGGCG GGTTCATGGC CATGATGGCC CTGGGCTTCT CGGTGAATCT GGTCACCCTG
TTCGGTATCA TTCTGGCCAT CGGCATCGTG GTGGACGACG CCATCATCGT GGTGGAAGGG
GCGGCGCACC ACATGGAACA CGGCGATTCG GCGCGCGACG CCACCGTGAA GGCCATGGTG
CAGCTGTTCG GCCCCATCAT CGGCATCACC CTGGTGCTGT CGTGCGTGTT CCTGCCCGCG
TCGTTCATGT CGGGCATCAC CGGGCAGCTG TACCGCCAGT TCGCCCTCGT CATCGCCTCC
ACGGCGCTGG TCAGCGCGCT GCTGGCCGCC ACCATGACCC CCGCCCAGTG CGCCCTGTTC
CTGAAGCCCA TCGTGCCGGG GCGCAACGCC TTCTACCGGG GATTCAACAA GGTGTACGAC
GCGGTGGAGC GGTTTTTCGT GGCGCTGCTG ACCACCATGG TGCACCACGC CTGGACCACC
ATGCTGGTCT TCGTGGGGCT GATCTCGGTC ACCTTCTGGT TTTTCTCCAC GCTGCCCACG
GGCTTTCTGC CCGACGAGGA CCAGGGCTAT GCGCTGGTGG CGGTGCAGTT GCCGGGCGCG
TCGTCGCAGT CGCGCACCCG TGAGGTGACG GCAAGGCTTG ATGCCATCCT TGCCGAAACA
CCGGGCGTGG CCAACTGGAT CACCTTCGGC GGCATGTCCA TCCTGAACAA CGCCAATACC
CCCAACTCGG CCACGATCTT CGTCATGTAC AAGGACTGGT CCGAGCGGGG CGACCTGACG
CAGGACAAGC TGGTGGCGGA CTTGCGCCGC AAGACCGGGA CCATCCAGGA GGGCATGGTG
TTGGTGGTCA CGCCGCCGCC CATCCAGGGG CTGGGCAACG CGGGCGGCTT CGAGATGATG
GTGCAGGACC GTGCCGCCAC CGGGGCGCAG GCGTTGGAAA ACGCAGCCTA CCAGATGTTG
GGGGCGGGCG GGGGGCAGTC GGGCCTTTCC GGGGTGGCCA CCACCTACAC CGCCCGCACT
CCGCAGCTGT ACGTGGATGT GGACCGTACC AAGGTCAAGG ACCACGGGGT GCAGCTGAGC
GACGTGTTCA GCACCATGCA GGCCTATCTT GGCTCGTCGT ACGTCAACGA CTTCAACAAA
TTCGGCAAGG CGTACCAGGT GCGCGTGCAG GCCGACAGCC GCTACCGGCT GGAGGCCGGG
GACATCGGCC AACTGGAGGT GCGCAACGCC GATGGCCGCA TGGTGCCCCT GGGCGCCATG
ACCAGCGTGC GCGACGTGGT GGGCCCCGAC GTGGTGACCC GCTACAACCT GTACCCGGCG
GCATCGCTGA TCGGCTCCGC CGCACCGGGC TTCAGTTCCG GCCAGGCGCT GGCCCTGATG
GAGGACATGG CCCGGCGCAC CCTGCCGTCG ACCATGGGCT TCGAGTGGAC CACCATGGCC
TACCAGGAAA AGGCCACCGG CAACGAGGCC TTCGCGGTGT TCGGGCTGGC GGTGCTGCTG
GTGTTCCTGG TGCTGGCCGC CCAGTACGAA AGCTGGTCGG CCCCGGCGGC CATCATCCTG
GTGGTGCCGC TGGCCCTGCT GGGCACCTGC ATCGCCGTGT CTGCGCGAGG CATGGACAAC
AACGTCTACA CCCAGATCGG CATCGTGCTG CTTATCGCGC TGGCCAGCAA GAACGCCATC
CTCATCGTGG AATTCGCGCG TGAACTGCGC ATGCACAAGG GCATGTCCAT CCCGGAGGCC
GCCGTGGAAG GCGCGCGTGC CCGGCTGCGG CCCATCCTGA TGACCTCGTT CGCGTTCATC
CTGGGGGTGG TGCCGCTGCT CACCGCCTCG GGTGCGGGCT CCGCCAGCCA GCGGGCGCTG
GGCACGGCGG TGTTCGGGGG CATGCTGGCC TCCACCTTCC TTGCCGTCAT GTTCGTGCCG
GTCTTCTTCA CCGTCATCCA ACGCCTGAGC GAGCGCGGCA TGCCGCAAAG CGCCAAGGCG
CAACCAGAAA ACGATCACCA GAGGTAG
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| Protein sequence | MFAKFFIDRP ILSNVIGIVL VLIGVVSLIM LPISQYPDIT PPTVEVKAIY PGSNSLVLAD
VVGAPIEQEV NGVEDMLYMS SKSANDGTYT LTITFALGTD IDMATVLVQN RVNVAMARLP
DEVKRQGVTV KKKSTAILQV VTLTSPDGSY DDLFLSNFAS LRVRDDLARI PGVGEAMVFG
AASYSMRVWL DAPRLKSLGL TTRDVLNAIS EQNVQVAAGQ IGAQPAPDTQ NFQFTVQTQG
RLSEVSEFED IIIRTATGGP TGRTVRVRDV ARVELGGQTY DLYAQKNGKP ASLVIIYQLP
GANALDVAQK VTATMQRIGK DFPAGVAWDI PYDTTRFVEA AIEQVYHTLF EAAVLVLAVI
LIFLQDWRAT LVPATVVPIT ILGGFMAMMA LGFSVNLVTL FGIILAIGIV VDDAIIVVEG
AAHHMEHGDS ARDATVKAMV QLFGPIIGIT LVLSCVFLPA SFMSGITGQL YRQFALVIAS
TALVSALLAA TMTPAQCALF LKPIVPGRNA FYRGFNKVYD AVERFFVALL TTMVHHAWTT
MLVFVGLISV TFWFFSTLPT GFLPDEDQGY ALVAVQLPGA SSQSRTREVT ARLDAILAET
PGVANWITFG GMSILNNANT PNSATIFVMY KDWSERGDLT QDKLVADLRR KTGTIQEGMV
LVVTPPPIQG LGNAGGFEMM VQDRAATGAQ ALENAAYQML GAGGGQSGLS GVATTYTART
PQLYVDVDRT KVKDHGVQLS DVFSTMQAYL GSSYVNDFNK FGKAYQVRVQ ADSRYRLEAG
DIGQLEVRNA DGRMVPLGAM TSVRDVVGPD VVTRYNLYPA ASLIGSAAPG FSSGQALALM
EDMARRTLPS TMGFEWTTMA YQEKATGNEA FAVFGLAVLL VFLVLAAQYE SWSAPAAIIL
VVPLALLGTC IAVSARGMDN NVYTQIGIVL LIALASKNAI LIVEFARELR MHKGMSIPEA
AVEGARARLR PILMTSFAFI LGVVPLLTAS GAGSASQRAL GTAVFGGMLA STFLAVMFVP
VFFTVIQRLS ERGMPQSAKA QPENDHQR
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