| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0032 |
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| Symbol | |
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| ID | 7171904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 39790 |
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| End bp | 41526 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643538524 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002434462 |
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| Protein GI | 218885141 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 0.183562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGGT TCGAGCGTCA TCGGAACACG CCCACCATGG GGGTGCGCGG CTGGCTGTTG
TTGCTCGCGC TGGTCGCCGG CCTGCCCACC ACCATATTTT CCGTGTTCGC CATGGTCGAG
CACATGCGGG CACAGCAGGA GAAGACCGAC GCGGAACTGC GGCGGCAGGT GCTGGCCGTG
GCCCAGGCCG TTGATGCGGA ACTTTCGGCC AAGGCGGCCA TGCTGCACGC CCTGGCGGCC
TCGCAGGATC CGGAAAGAAT GGATATCGGC CAGTTGTACC GCCAAGCCAA GGGCGTGGGC
AGCGTGCACC GCGAGGTGCA GTCGCTGGCG CTGGCGGGTC ATGACGGCAG CCAGGTTTTC
AACACGTGGG AACAACTGGG CGTTGCGCTG CCGCCCACGG GCGACCTGAC GTCCGTCCGG
CGTGCCCTGG ACGAGGACCG GCCCGTGGTG TCCGATCTGT TTCAGGGCAG CATCCTGCAC
CAGCCGGTCA CGGCGCTGGG CGTGCCGATG CAGGTGGACC GGGGGCACCG GTACGTGCTG
CGCATGTACA TCGGGGTGGC GGCGTACGCC CGCCTGCTGG AGGAGGAACG CTTGCCGGAG
GGGTGGACTT CCACGCTGGT GGACGGGCAG GGGACCATCC TGGCCCGGAC GCTGCGGCCC
GAGGTGACCG TGGGGCAGGT GGTGGGGCCG CGCCTGCGCG AGGTGCTTCA CTCTTCCGAA
GTGATGGAAG CAGACAATCG CGAGGGGGTT CCCGTGCGCT TTGCCGTGGC ACCGGTGGGG
ACGTGGGGCT GGCACGCGGT GGTGCAAGTG CCCGTGGCCA TGTTGCAGGC AGCCATGCGC
GCGTATCTGT TGCGCCTGGC GGGCATCGGC GGGGCCTGCA TCGTCATGGG GGTTGCCGGG
GCGTGGCTGC TGTCGCGCCG TTTCGTCAGG GAGGTGGAAC TGGCGGCCCG CTCGTGCCGT
CTGCCGGAGG CAGAGGACGA ACCGGCCCGC CGCACCATGG TGCGGGAATT GCGCCAGGTG
GGTGATGAAC TGGCCGCCGC CCGCGAGCGC GAGGAAATGG CCCTGCGCGA CGGCCTGACC
GGCCTGGCGG GACGGGCGCT GTTTCTGAGG CATGCCCGGC GCCTTCTGGA AACCAGCCGC
CACGACACAT CATTGCGGCT GGCCGTCATG TTCATCGATC TTGACGGGTT CAAGCAACTC
AACGACCGGT ACGGCCACGC CGAAGGAGAT GCGGTGCTGC TTCGCACGGC CCGGGTGCTG
GAGGGCGCGG TGCGTTCGTC GGATGTCGTG GGGCGCCTTG GTGGGGACGA ATTCGTGCTG
TGCCAGGTCT TGCAGGCCGA CACTGCCTGC GAGGTGGCCC GCGGCGTGGC CGCGCGCGTG
GTATCCGGGG TGGCGCAGAT AGGGCTTGGC GTCGGATGCA GCGTGGGCAT CGCGCTGGGC
AGGGCGGGCG GATATCCCGA ATTGTCGGGA GAGGACGCCT CCGCAGGTCT GCCGGACGAT
GGAACGGACG CCGGACAGAC TGCCATGCGC CCGGAAGATG GTGGTGGCGG GACTGGTGAC
GGAAGCGGCG GGGCAGATGG CCTTGCGGAC GGCAGTCCCC GTGGCGTGGA AGCAACGTTG
CCCGGTGCCC CTGCCCCCCT GCGCGTTCTG CTGGAAGAGG CCGACAAGGC CATGTACGTG
GCCAAGCAGG CGGGCAAGAA CAGCTACCAC CTGCAGGACA TGTCCACCTG CGAGTGA
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| Protein sequence | MARFERHRNT PTMGVRGWLL LLALVAGLPT TIFSVFAMVE HMRAQQEKTD AELRRQVLAV
AQAVDAELSA KAAMLHALAA SQDPERMDIG QLYRQAKGVG SVHREVQSLA LAGHDGSQVF
NTWEQLGVAL PPTGDLTSVR RALDEDRPVV SDLFQGSILH QPVTALGVPM QVDRGHRYVL
RMYIGVAAYA RLLEEERLPE GWTSTLVDGQ GTILARTLRP EVTVGQVVGP RLREVLHSSE
VMEADNREGV PVRFAVAPVG TWGWHAVVQV PVAMLQAAMR AYLLRLAGIG GACIVMGVAG
AWLLSRRFVR EVELAARSCR LPEAEDEPAR RTMVRELRQV GDELAAARER EEMALRDGLT
GLAGRALFLR HARRLLETSR HDTSLRLAVM FIDLDGFKQL NDRYGHAEGD AVLLRTARVL
EGAVRSSDVV GRLGGDEFVL CQVLQADTAC EVARGVAARV VSGVAQIGLG VGCSVGIALG
RAGGYPELSG EDASAGLPDD GTDAGQTAMR PEDGGGGTGD GSGGADGLAD GSPRGVEATL
PGAPAPLRVL LEEADKAMYV AKQAGKNSYH LQDMSTCE
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