| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0011 |
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| Symbol | |
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| ID | 7171883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 14550 |
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| End bp | 15929 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643538503 |
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| Product | serine dehydratase alpha chain |
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| Protein accession | YP_002434441 |
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| Protein GI | 218885120 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.0204845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCTC TGGTCGCCAC CATAGAAACG TCGCTGTTCG ACATGTTCGA GGCCGGTCCC
GGCCCGTCCA GTTCCCATAC CATCGGCCCC ATGAAGGCCG GGCACGACTT CCGCACACTG
TGCGCGGCCC TGCCGCCAGA GGTGCTGGCC TGCGCGGCGG ACATCCGGGT GCGTCTGTTC
GGCTCGCTGA GCGCCACCGG CGTGGGCCAC GGCACCACCG GCGCGGTGCT GGCCGGGCTG
CTGGGGCACC GTCCCGCCAC CTGCCCGCCG GGGCTGCTGG AATCGTTGCC CGCGCTGCCG
GAAGGGGAAC GCACCCTGCG CCTGGGCCCG GCGGCCCTGG TGCTGGCCGA AGGCACGGTG
CGGCGCGATG CGGTGCAGCA CGCCTACCCC TTCAGCAACA CGCTGGTCAT GGAACTGCTG
GATGCGCACG GCGCGGTGCT GTGCGAGCGC GAGTACTATT CCGTGGGCGG CGGGTTCATC
CAGTGGAAGG GCTGGCAGCC CGAAGAACGC GGCAGGCCCG CGCACCCGTA CCGCAGCATG
GCGCAACTGC GCGCGCGGCT GGTGGAAACC GGGCTGACCA TCCATGAACT GATCCTGGAA
AACGAAATGG CGGTTACCGG CATGGGCCGT GCCGCCATCC TGGACCGGCT GGCCGCCATC
ATCGAACTGA TGGAAGCCAG TGTGCGGCGC GGCATTGAGG ACGGCGGCCC GCTGCCCGGC
ACCCTGGGGG TGCACCGCAA GGCCCGCGTG CTGCTGATGC GCGCCCAGCG CCTGCCCAAC
GAGGTGGATG TCTTTCTGGG GCGGCTGAAC GCCTACGCCT TTGCCGCCGC CGAGGAAAAC
GCGGCGGGCG GGGTCATCGT CACCGCGCCC ACCTGCGGCG CGGCGGGAGT GATGCCCGCG
CTGCTCTACG CCATGCGCCA CGACCTTGCC ATCGGCGACC GGGCCGTGCG CGAGGGGGTG
CTGGCATCGG CGGCGGTGGG CTTTCTGGCC AAGCACAACG CGGGCATCGC CGGGGCCGAG
GTGGGCTGCC AGGGCGAGGT GGGCGTGGCT TCGGCCATGG CCGCCGCCAT GCTGGCCCAC
GCGCGCGGCA ACCCGGTGCA CGTGGTGGAA AACGCGGCGG AAATCGCCCT GGAACACCAC
CTGGGCCTGA CCTGCGACCC GGTGGGCGGC TACGTGCAGA TTCCGTGCAT CGAGCGCAAC
GCCGTGGGCG CGGTGAAGGC CTACAACGCC TGCCTGCTGG CCACCTGCGA AGACCCGCGC
CACCACCGGG TGACGCTGGA CAGCGTCATC GCGGCCATGG CCGAGATAGG GCGCGACATG
AACGCCAAGT TCAAGGAAAC GTCGTCCGGC GGGCTTGCGG TCAGCGTGGT GGAGTGCTGA
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| Protein sequence | MQPLVATIET SLFDMFEAGP GPSSSHTIGP MKAGHDFRTL CAALPPEVLA CAADIRVRLF
GSLSATGVGH GTTGAVLAGL LGHRPATCPP GLLESLPALP EGERTLRLGP AALVLAEGTV
RRDAVQHAYP FSNTLVMELL DAHGAVLCER EYYSVGGGFI QWKGWQPEER GRPAHPYRSM
AQLRARLVET GLTIHELILE NEMAVTGMGR AAILDRLAAI IELMEASVRR GIEDGGPLPG
TLGVHRKARV LLMRAQRLPN EVDVFLGRLN AYAFAAAEEN AAGGVIVTAP TCGAAGVMPA
LLYAMRHDLA IGDRAVREGV LASAAVGFLA KHNAGIAGAE VGCQGEVGVA SAMAAAMLAH
ARGNPVHVVE NAAEIALEHH LGLTCDPVGG YVQIPCIERN AVGAVKAYNA CLLATCEDPR
HHRVTLDSVI AAMAEIGRDM NAKFKETSSG GLAVSVVEC
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