Gene Dtox_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1334 
Symbol 
ID8428283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1361360 
End bp1362466 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content40% 
IMG OID645033670 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003190834 
Protein GI258514612 
COG category[R] General function prediction only 
COG ID[COG2768] Uncharacterized Fe-S center protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0262596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCA AAGTATATTT TGTAAATTTG CGCACGAGGA CAGATAAGGG TAATAAAATT 
AGCAAAATAA GAAACTTATT TGATCAGGCT GGTTTTAATG AGCTTATTAA GAAAGATGAT
ATTACAGCTA TTAAATTGCA CTTCGGTGAA CGTGGAAGTG ATGGCTTTAT TAGCCCTCTT
TTTGTTCGGC AAGTGGTGGA TAAAATTAAG GAAAAGGGTG CTAAACCTTT TCTAACCGAT
ACTAATACGC TCTACTCTGG AAGTCGGCAT AATTCGGTTG ACCATTTACT GACTGCATTG
GAGCATGGTT TTGATTATAC GGTTACAGGT GCGCCAATTA TCATTGCCGA TGGACTACGC
AGTGATAATA TTACTGAAAT AGAGATTGAT AAAAAACACT TTAAGAAAGT GAAACTGGCT
AAAGATATTG TTAATGCTGA CAGCGTAATT GTATTATCTC ACTTTAAGGG GCATGAGATG
GGTGGCTTCG GTGGGGCAAT AAAAAATCTT GCCATGGGTG GAGCACCAGC CATTGGTAAA
AAGGAGCAGC ATGGTACTAA GATTGTAGTT GATGAAGATA AATGTATTGG TTGTGGTGGG
TGCAGCGAAG TTTGTCCAGA ACAGGCTATA ACTATGAGTG AAATGAAGGC AAATATTGAC
TTGGATAAAT GTATCGGCTG TGGTGAGTGC CTAACCGTTT GTCCAGTAAA GGCTAACGGG
ATCGACTGGC AGACAGACTT AGAAGCTTTT CTTGAACGGA TGGCCGAATA CGGATATGGC
TTTGCCAAGG CACATGAGAA ACGTATCGGT TATATAAACT TTCTAATAAA TATTACGCCT
GATTGTGATT GCGCTTCGTG GAGCGATGCA CCTATTGTTC CTGATATCGG TTTTTTGGCA
TCTACTGATC CTGTAGCTAT TGATCAGGCA AGTTATGATC TGGTAAATAA ACAGTGTGGG
TTCTCTGAGT CTTTTCTTTC TTGCAATCAT GAGTCCGGTG CGGATAAGTT TAAAGGTTTG
CGCTCTTATA TAGACGGTAC TATCCAAATG CGTCATGGTG AAGAAATCGG TATGGGCAGC
CGAGATTATG AATTAATCGT CCTGTAG
 
Protein sequence
MSSKVYFVNL RTRTDKGNKI SKIRNLFDQA GFNELIKKDD ITAIKLHFGE RGSDGFISPL 
FVRQVVDKIK EKGAKPFLTD TNTLYSGSRH NSVDHLLTAL EHGFDYTVTG APIIIADGLR
SDNITEIEID KKHFKKVKLA KDIVNADSVI VLSHFKGHEM GGFGGAIKNL AMGGAPAIGK
KEQHGTKIVV DEDKCIGCGG CSEVCPEQAI TMSEMKANID LDKCIGCGEC LTVCPVKANG
IDWQTDLEAF LERMAEYGYG FAKAHEKRIG YINFLINITP DCDCASWSDA PIVPDIGFLA
STDPVAIDQA SYDLVNKQCG FSESFLSCNH ESGADKFKGL RSYIDGTIQM RHGEEIGMGS
RDYELIVL