Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3524 |
Symbol | pufM |
ID | 5713755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3702726 |
End bp | 3703718 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641269453 |
Product | photosynthetic reaction center subunit M |
Protein accession | YP_001534858 |
Protein GI | 159046064 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01115] photosynthetic reaction center M subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.157228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.60913 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGT ATCAGAACAT ATTCACACAA GTCCAAGTTC AGGGCCCGGC AGAGCTCGGC GTGGACAACG AGAACAACCT CACCGAGGAG CGCACGACGG GGACCGGTTT CTCCCAGCTC ATCGGTTGGA TCGGCAACGC CCAGCTGGGC CCGATCTACC TGGGGTGGTT CGGCATCATC AGCCTCGTGA CCGGCACGCT CTGGTTCAAT ATCGTGGGCT TCAACATGCT CAGCCAGGTC GGCTACAGCA TTCCGGAATT CATCCGGCAG CTGTTCTGGC TGGCCCTCGA GCCGCCCTCG CCGGAATACG GGCTGCGCAT GCCGCCGCTC GATGACGGCG GCTGGTTCAT CATCGCGAGC TTCTTCCTGC TCGTGTCGGT GATCTCCTGG TGGTTGCGGT CCTATCAGCT GGCCGAGATG CACAAGATGG GCAAGCACGT GGCCTGGGCC TTTGCCGCCG CCATCTGGCT CTTCCTCGTG CTGGGTCTCT TCCGTCCCAT CCTGATGGGC TCCTGGTCCG AGGCTGTGCC TTACGGCATC TTCCCGCACC TCGATTGGAC CACGGCCTTC TCGATCCGCT ACGGCAACCT CTACTACAAC CCGTTCCACG CGCTTTCGAT CGTGTTCCTC TACGGTTCGG TTCTGTTGTT CGCGATGCAC GGGGCCACGA TCCTCGCCGT GACCCGCTTC GGCGGCGACC GGGAGCTGGA GCAGATCTAT GACCGCGGCA CCGCTTCGGA ACGTGCGGGC CTCTTCTGGC GCTGGACCAT GGGTTTCAAC GCCACGATGG AGGGTATTCA CCGCTGGGCC TGGTGGTTCG CCGTGCTCAC GCCGATCACC GGCGGGATAG GGATCCTGCT GACCGGCACC GTGGTGGACA ACTGGTTCCT CTGGGCCGTC GAGCACAACT TCGCGCCCGA TTACACCCAG GACTACGGGT ATGAAGCCTA CACCACCTAC GATGGCTTCC TTGGCCGAGA GGAGGGCAAC TGA
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Protein sequence | MPEYQNIFTQ VQVQGPAELG VDNENNLTEE RTTGTGFSQL IGWIGNAQLG PIYLGWFGII SLVTGTLWFN IVGFNMLSQV GYSIPEFIRQ LFWLALEPPS PEYGLRMPPL DDGGWFIIAS FFLLVSVISW WLRSYQLAEM HKMGKHVAWA FAAAIWLFLV LGLFRPILMG SWSEAVPYGI FPHLDWTTAF SIRYGNLYYN PFHALSIVFL YGSVLLFAMH GATILAVTRF GGDRELEQIY DRGTASERAG LFWRWTMGFN ATMEGIHRWA WWFAVLTPIT GGIGILLTGT VVDNWFLWAV EHNFAPDYTQ DYGYEAYTTY DGFLGREEGN
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