Gene Dshi_2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2975 
Symboldut 
ID5710826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3142690 
End bp3143157 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content71% 
IMG OID641268901 
Productdeoxyuridine 5'-triphosphate nucleotidohydrolase 
Protein accessionYP_001534309 
Protein GI159045515 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0756] dUTPase 
TIGRFAM ID[TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGA TGATCGAGGT GCTGCGCGAG CCCTGGGCGG ATGAGGCAAT CCCCTTGCCC 
AGCTATGCGA CCGTCGGAGC GGCGGGTGCG GACCTGCGCG CCAACCTGCC GCCCGAGATC
CGCGATCAAG GCGTCGAGAT CCAGCCGCTC TGCCGGGTGA TCGTGCCCAC GGGGCTGCGG
GTGGCGATCC CGGCGGGCTA CGAGATGCAG ATCCGGCCGC GATCTGGCCT TGCGCTGAAA
CATGGGCTCA GCCTGCCCAA CACGCCGGGC ACCATCGACA GCGATTATCG CGGTCCCCTG
GGCGTGCTGC TGACGGTGAT CGGGACCGAG GCGGTGACGC TGCACCATGG CGACCGGATC
GCCCAGGCGG TGATCGCGCC GGTGGTCCAG GCGGTGTTCG CGCCGGTGGA CCGGCTGGAA
GAGACCGCGC GCGGCGCGGG CGGCTTCGGC TCGACAGGGC GGGGGTAG
 
Protein sequence
MSLMIEVLRE PWADEAIPLP SYATVGAAGA DLRANLPPEI RDQGVEIQPL CRVIVPTGLR 
VAIPAGYEMQ IRPRSGLALK HGLSLPNTPG TIDSDYRGPL GVLLTVIGTE AVTLHHGDRI
AQAVIAPVVQ AVFAPVDRLE ETARGAGGFG STGRG