| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2369 |
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| Symbol | |
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| ID | 8420229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2704409 |
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| End bp | 2708359 |
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| Gene Length | 3951 bp |
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| Protein Length | 1316 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038970 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_003199229 |
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| Protein GI | 258406487 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCAG CCCCGACTCC GTCTGAACGC CGTCTCGCCC GCCATTGTGC CGAGGCCTCC
CGTGCGCCGT TTCTGGTTTT GGACCACACG CTTTGCATCA TTGCCGCCAA CACCAGCGCG
GCGGCTTTGC TCCAGACATC GGCCGACCTT CTCCCGGGAC AAAAACTGCC TGATTTTGCC
GGGCAAGGGC AGCCGTGGCT CGCAAAGTTA TGTGCCCATC TGCACCGTTT CCCGGTCTTC
ACCGATCTCG AACTCGATCG CGGTATAACG GCCAACAGTC GGCTTTTCGC CGGTGACACC
GAAACGCCCC GCCTTCTGGC TGTGGGGCTG GACCTGCCCA GTTCCCACCC GCTTCCGGGC
CGGGATACCA CCGATGCGGA GCACCGCTAT CAAACCCTGG TGACCAACGC CCCGCTGCTG
ATCCAATCCG TGGGGCCAGA CGGACTGTTT CAGTTCGTCA ACCCGGCCTG GGAAGAGACA
CTGGGGTACT CGCAGGATGA AGCACTGCAG ATGTTCTTTG AGGACATCAT CGCCCCGGAA
CACCGCTCCC ATTGCCGGAA TCGTTTTCAA GGATTGCTGC AGGGCCGGGA ATTTCGCGAC
ATTCGCGTCC CGATGCTCAC CAAGGCTGGA CGGATTATCC AGACCGAAGC CCATCTCTTC
CCCCGTCTGC AAAACGGTGA AGTAATCGCC ACCCAGGGCA TTTTTCAGGA CATCACCGAA
CGGCTCCAGG CTGAAAAGCG GGAGTTGGCC GCTCAGCAGC GTCTCCGGGA TTTTTTCCAA
TTGGCGCCGG CGGTCATCTA CCGCCTCGAT CCAGACTCCT GGCAGGTCCT GGACGTAACG
CCCTATGTCA GCGAACTGCT GGGCTACACT ATTCAGGAAA CGCTGGCTCC GTCCTGGTGG
CGCGACCACC TCCATCCCGA GGACAAACAC GCGGCGTTTG AGGCCAATGC CGACCTCTTC
GCTACCGGCA GCGTGGCTCA CGAATACCGC ATCCGCCATA AAAAAGGGCA CTGGGTCTGG
GTCCAGGACC GCATCAAGCT CATCCGCGAC AACCAGGGCC AGCCGCAAGA GATCATCGGG
GCCTGGCTCA ATATCTCGGA ACGGCGGGCC CTGGAAATCC AGCTTCAGGA AAGCGAAGCC
CGCTACCGAA ACATTTTCAA CAATCACCAT ACCGTGATGT TCATCATCGA TCCTGCAAAC
GGCCAAATCG AGGACGCCAA TCCGGCGGCA GAGACCTTTT ATGGCTGGGA CCGAGCTACT
TTGCTGTCCA TGAATGTCGC TGAGATCAAC ACCCTGACCG AGCGAGAAGT CCAAGAGGAA
ATGCAAAACG CCCGTCGGCA GCGGCGAACC TATTTCGAAT TCCAGCACCG GCGCGCCGAT
GGCAGCGTCC GCTTTGTCGA GGTCTACAGC GGGCCGGTCC ATCTCTATGG CCGTAACCTG
CTCTATTCCA TTGTCCACGA CGCCACCGAG CGGGTTCAGG CCCGCGACGA GATCTGGCGC
CAGAAAAACC TGCTCGCCTC CATCAATACC ATCCTCCATG ACGCCCTGTA TTGCGATACC
GAGGCCAAAA TCGCCGAAAG CGGTTTGGAG GCCGCCCTGA AATTGACCGG CAGCAGCGGT
GGATGGGTCG GGATTCGAAC TCCGGAGGGC AAGGTGAATA CCCTGGCCTT GCAGTGGAGC
GGTTCTGAGG GGACGCCTCA CAAGGGACCG CACCAGCTCC AGGGATTGCA CATGCAGGGC
CTGTGGGGAG CGGTTATCCA GCAGGGTGCC TCATTGTTGA CCAATGCTCC GCAAAAGCAT
CCTCGTTTCG AAGGACTGCC TGAAAACCAC ATCCCGCTGC AAAACTTCCT CGGAGTGCCG
CTGCAGCAAG GAGGGGTGAC CATTGGCTTG ATCGCCCTGG CCAACGCTTC CGAAGGGTTC
ACCGAAACCG ATCGCACCAC TGCGGAGGAT CTCTCCGTCG CCCTGGCCGA AGCCCTGCAG
CGCAAAAAGG CCGATCAGGC TCTGCACGCC TTCAATGCTG AACTTGAGGA GCGGGTCCGG
GCCCGGACCA CTGATCTGGA AAAGGCCAAC ACCGCCCTGG AAGAAGCCAA AGACGCCGCC
GAGGTGGCCA ACCGGACCAA ATCCGCCTTT TTGGCCAATA TGAGCCACGA AATCCGGACG
CCCATGAACG CCATTCTGGG CATGCTCCAC TTGATCAAAC AAACGCATCT GTCTGCAAAG
CAGGCCAATT ATATGGACAA GGTCCATACC TCAACCGAGG CCTTACTCAA CATCATCAAC
GACATCCTCG ACTTCTCCAA AATCGAATCC GGCAAGCTCC AATTGGAGCA GACCGAATTC
GATATCGAAA CCGAGATGCG GACCGTGGCG GAATTGTTGG GGCTGGAGGC CCAGCAAAAA
GGCATTGTGC TCAACTTCGA TCTGGACCTG AATGCTCCGG AACGATTCGT CGGCGATGCC
ATGCGATTGC GCCAGGTCCT GATCAACCTG GTGGGCAACG CCATCAAATT TACCGAGCAC
GGCCATATCC AGGTCACCCA ACGCCTGACG CAGTGGGTCG AGGCCCAGGC AGAATGTATT
TTCGAGGTCG AAGACACCGG ACCAGGCATT GCCCCGGGAC AACAGGAACT GCTCTTTCAG
GCCTTCAGTC AGGCCGACGC AAGCACCACC CGGGAATTCG GGGGAACCGG CCTGGGACTG
GCCATCAGCA AGCGGTTGGT GGAAATGATG GGCGGGGAAA TAGGCTTGCA GAGCACCCCC
GGCCAGGGAA GCCGTTTCAC GTTTCGCGTT GTTTTGGATG TGCCGCCGCA CACACCGCCT
CTGCTCCGAT GCGGGCCGGT GGTCGGGATG GACGCCACTG CCGTAGCGGT CTCGCCCGAG
CCTTTGGTGA CCAAAACCAT CGGGCACATT CTTCGCGCCT GGGGGTGGTC CTGCCTGGAA
GCTTCGAACT CCGATGCGGC GCGGACGGAG TTGGACGACG GCGCCTGTCC CAATGTCGAC
GTCCTGCTCG TGGACACTGC CGAGAGCGGG GCGAGTTTGA CCCCCTTGCT GATCCACCCC
GCGGTCGGTT CGGCCCCTGT TATCCGCATC CAGAATGACA CCACTTGGAC CGAAGACGCA
CCGCTGAACG TGACGCTGCC AATTTTTCCG TCCTCATTGG CAAACACCTT GGCCAAGGCG
CTTGGCCTGG TCGAGAGTGC CACCGAAACC CAATCCGAAC CGGCCGTGGA CCCCGCTGCC
AATTCCCACC ACCAGCCCCA CGTTCTGGTC GTCGAGGACA ACCTGTTGAA TCAGGAGGTG
GCCCAGGAAA TCCTCGAACA GGCTGGCATG GCGGTCACCC TGGCCGATAC CGGGGAACGG
GCTTTGGAAC TCGCCGCTGA ACATGCTTTC GATGTCGTCC TTATGGACAT CCAGATGCCG
GGTATGGACG GACTCCAGAC AACACAGGAA CTGCGCCGCA TGGCTGACAA AACGGGCAAG
CATTTTTTGC AGAACCTTCC GGTCATCGCC ATGACCGGTC ACGCCATGAA GAGCGACCAG
AACAGGTGCC TGGCCGCGGG CATGGACGAC TTCATTGCCA AGCCGTTTCG GATCGACCAA
TTGTTCGCCA CCTTGCAGCG GTGGCTTCCT GCCCTGGCTC CCCAGGAAAA AGGAAGTGCC
CCTTCTTCGG CTGACAAGGG CCGCGGCGAA GCGTCACTCC AGTTTACAGA AAACCCCGAC
ACCCCCCGCA CGCTTGTGGA AGCGCTGGAA ACTCTGCAGC AGGCGGTGTC CTCGCGCAAA
CCCAAGCAAT ACAAGTCGGC CTGGCAGGAT CTGCGAAACC ACATCTGGCC GCACCACTTG
GCCGCAGACA TGCGTACCTT GAAATCGGCC CTGGACCGCT ATAGATTTGA GGACGCCCTG
CGCCAACTGG AGACCGCCAA GTCAAAACTG CAAGGAACTC CGCGTGCCTG A
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| Protein sequence | MPSAPTPSER RLARHCAEAS RAPFLVLDHT LCIIAANTSA AALLQTSADL LPGQKLPDFA
GQGQPWLAKL CAHLHRFPVF TDLELDRGIT ANSRLFAGDT ETPRLLAVGL DLPSSHPLPG
RDTTDAEHRY QTLVTNAPLL IQSVGPDGLF QFVNPAWEET LGYSQDEALQ MFFEDIIAPE
HRSHCRNRFQ GLLQGREFRD IRVPMLTKAG RIIQTEAHLF PRLQNGEVIA TQGIFQDITE
RLQAEKRELA AQQRLRDFFQ LAPAVIYRLD PDSWQVLDVT PYVSELLGYT IQETLAPSWW
RDHLHPEDKH AAFEANADLF ATGSVAHEYR IRHKKGHWVW VQDRIKLIRD NQGQPQEIIG
AWLNISERRA LEIQLQESEA RYRNIFNNHH TVMFIIDPAN GQIEDANPAA ETFYGWDRAT
LLSMNVAEIN TLTEREVQEE MQNARRQRRT YFEFQHRRAD GSVRFVEVYS GPVHLYGRNL
LYSIVHDATE RVQARDEIWR QKNLLASINT ILHDALYCDT EAKIAESGLE AALKLTGSSG
GWVGIRTPEG KVNTLALQWS GSEGTPHKGP HQLQGLHMQG LWGAVIQQGA SLLTNAPQKH
PRFEGLPENH IPLQNFLGVP LQQGGVTIGL IALANASEGF TETDRTTAED LSVALAEALQ
RKKADQALHA FNAELEERVR ARTTDLEKAN TALEEAKDAA EVANRTKSAF LANMSHEIRT
PMNAILGMLH LIKQTHLSAK QANYMDKVHT STEALLNIIN DILDFSKIES GKLQLEQTEF
DIETEMRTVA ELLGLEAQQK GIVLNFDLDL NAPERFVGDA MRLRQVLINL VGNAIKFTEH
GHIQVTQRLT QWVEAQAECI FEVEDTGPGI APGQQELLFQ AFSQADASTT REFGGTGLGL
AISKRLVEMM GGEIGLQSTP GQGSRFTFRV VLDVPPHTPP LLRCGPVVGM DATAVAVSPE
PLVTKTIGHI LRAWGWSCLE ASNSDAARTE LDDGACPNVD VLLVDTAESG ASLTPLLIHP
AVGSAPVIRI QNDTTWTEDA PLNVTLPIFP SSLANTLAKA LGLVESATET QSEPAVDPAA
NSHHQPHVLV VEDNLLNQEV AQEILEQAGM AVTLADTGER ALELAAEHAF DVVLMDIQMP
GMDGLQTTQE LRRMADKTGK HFLQNLPVIA MTGHAMKSDQ NRCLAAGMDD FIAKPFRIDQ
LFATLQRWLP ALAPQEKGSA PSSADKGRGE ASLQFTENPD TPRTLVEALE TLQQAVSSRK
PKQYKSAWQD LRNHIWPHHL AADMRTLKSA LDRYRFEDAL RQLETAKSKL QGTPRA
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