| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2066 |
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| Symbol | rpsJ |
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| ID | 8419911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2352895 |
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| End bp | 2353212 |
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| Gene Length | 318 bp |
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| Protein Length | 105 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645038654 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_003198928 |
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| Protein GI | 258406186 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000145478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.204549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTGAAA TGAACAGTGA CCGCATTCGA ATTAAACTCA AGGCCTACGA TTACCGCATT
TTGGACAAGG CCGTCGCTGA AATCGTGGAT TCGGCAAAGA ATACCGGTGC GAGCATTGCC
GGGCCCATCC CGTTGCCGAC GCGGATACAC AAATACACGG TCAATCGTTC TGTGCACGTG
AACAAGAAAT CCCGCGAACA GTTCGAAATG CGAATCCATA AGCGGTTGTT GGATATCCTT
GAACCGACAC AGCAGACCGT GGACGCCTTG GGGAAATTGA GTCTGCCGGC CGGCGTGGAT
GTGGAAATCA AGCTTTAG
|
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| Protein sequence | MVEMNSDRIR IKLKAYDYRI LDKAVAEIVD SAKNTGASIA GPIPLPTRIH KYTVNRSVHV
NKKSREQFEM RIHKRLLDIL EPTQQTVDAL GKLSLPAGVD VEIKL
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