| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1895 |
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| Symbol | |
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| ID | 8419738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2176716 |
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| End bp | 2178437 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645038481 |
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| Product | DNA primase |
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| Protein accession | YP_003198757 |
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| Protein GI | 258406015 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.158344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0137969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGAC GCAGCGGCGA CACTATCGAG GCGATCAAGG CCCGCTTGAA TATCGTCGAC
ATTGTCCGTC GTTATGTGGA TCTGCGCCAA GTGGGAGACC GCTGGGCCGG AGTCTGCCCC
TTCCACCAGG AAACCAAGCC CTCCCTGAGC GTCCATCCGG AGAAAGGCTT CTTTTATTGC
TTCGGCTGCC AGGCCAGCGG GGACCTGTTT GATTTTTACT GCATGATCAA CGGCCTGGAG
TTCCGCCAGG CCCTTGAGGA ACTTGCCCGG GAAGCCGGGG TGACCCTCAA TGACCGCCCC
GACCCCCAGG CCGCCCAGCG CCAGCAGGAG CGCCGGGCCT GTCTGGAAAT GCACTCCCTG
GCCCAGAGTT TTTTCCAGCG CCAGTTGGAA TCCGCCGAGG CCCGGCAGGC CCGGGAATAC
CTCGAAGCCC GGGGGGTGGA CGAAACCATG CAGGACTATT TCGGGCTCGG CTATGCGCCG
GAGCAGTGGC AAGCCCTGTG CGGCCACCTC CAGCAAAGCG GCTACAGTCC GCAAAAAGGG
GTTACCGCTG GGCTGCTGTC CCAGAATAAA AAGGGCCGGA TCTATGACCG GTTCCGGGGA
CGGGTGACCT TCCCCATTCA CGATCTGGGC GGCAAGGTCA TTGCCTTCGG GGGCCGGGTC
ATCGGCGAGG GTGAGCCGAA ATATCTCAAC AGCAGTGATT CGCCCATCTA CAAGAAAGGG
GCGCATCTCT ACGGCCTGTA CCAGGCCCGG CAGGCCGTGA CCCAGTCCAA AGAGGTCCTG
CTGACCGAAG GGTATGCCGA TGTCATCGCC CTGGTCCGCT ATGGCTTCAC CAATGCCTGC
GGCGTGCTGG GCACGGCCCT GACCGAAGAG CAGGTCCGGC GCTTGGCCGG TTTGGCCCGC
CGGGTGACCC TGGTCTACGA CGGCGACCGG GCCGGACGTC AGGCCGCGTC CCGCAGCGCG
GAAATGCTTC TGCGGCAAGG GGTCCAATGC CGGGTGGTCA GTCTCCCCGA TGGCGAGGAC
GTGGACAGTC TGCTCCAGGG CCAGGGCGCG GCCGGTTTTC AGCGGTATGT CCGCGAGGCA
GAGGAAGGGT TGTCGTTTTG TCTGCGGGTG CTGCGCGAAA GCGGCGTGGC CAGGGAGATT
CTGCGTTGGG CGACCGAGTT TTTGAACGGC CTGCACGACA GCACCTGGCA GGCCTATTTC
CTGCCCCGTG TGGCCGCGGG CCTGGAGTTG TCCGAGACCG AACTGCGGCG CGCCGTGGAC
GGCAATCGGG AAGCGAAGAC CAGCGGTGGC GCGCAGCAAC GCGGCCAGCG ATTGGAACGC
ACCTCTCCCG GGCAAAGGGA CCGGGAACTC CTCCATTTTG CGATTTCTTT TCCGGCCTAC
ACCAAGCGGC TCGACGTCCT GGGGCTGGAC CACGCCCTGG CCACGGAGCG CGGCCGGCAA
CTGTGGCGGA AAATTCAGGC CTTTTCGCGA GAAGAATTGC TTTTACACCT GGACGAAGGG
GAAAAGCGAT TTTATATCCA ATCTGAACTG GATCCTATCC CGGCGGAGCG TGAACGTCTC
GTCTGGGAGG GGATCGAACA ATTTTTACAC AGGACGCGCC AGGATGAGAA GCTGCATGAG
ATGCGTACGG CACTCAAAAA GGCGCAGGAA GCTGGAGATG CGGAAGAAAT GGACCGTCTT
CTGCAAGCAT ATACCGACAT GCTAGGGGGG CTCAATGAGT AA
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| Protein sequence | MARRSGDTIE AIKARLNIVD IVRRYVDLRQ VGDRWAGVCP FHQETKPSLS VHPEKGFFYC
FGCQASGDLF DFYCMINGLE FRQALEELAR EAGVTLNDRP DPQAAQRQQE RRACLEMHSL
AQSFFQRQLE SAEARQAREY LEARGVDETM QDYFGLGYAP EQWQALCGHL QQSGYSPQKG
VTAGLLSQNK KGRIYDRFRG RVTFPIHDLG GKVIAFGGRV IGEGEPKYLN SSDSPIYKKG
AHLYGLYQAR QAVTQSKEVL LTEGYADVIA LVRYGFTNAC GVLGTALTEE QVRRLAGLAR
RVTLVYDGDR AGRQAASRSA EMLLRQGVQC RVVSLPDGED VDSLLQGQGA AGFQRYVREA
EEGLSFCLRV LRESGVAREI LRWATEFLNG LHDSTWQAYF LPRVAAGLEL SETELRRAVD
GNREAKTSGG AQQRGQRLER TSPGQRDREL LHFAISFPAY TKRLDVLGLD HALATERGRQ
LWRKIQAFSR EELLLHLDEG EKRFYIQSEL DPIPAERERL VWEGIEQFLH RTRQDEKLHE
MRTALKKAQE AGDAEEMDRL LQAYTDMLGG LNE
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