| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1880 |
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| Symbol | |
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| ID | 8419723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2156067 |
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| End bp | 2157236 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645038466 |
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| Product | filamentation induced by cAMP protein Fic |
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| Protein accession | YP_003198742 |
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| Protein GI | 258406000 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3177] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000804249 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000268134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAACGAG CACTCCAAGG GCACTATGTC CCCATTTCCA CCACGGGGAT TACGGCCCAG
GCCTTTGTCC CAGCGCCACT TCCTCCCCAC CCGGATATCA AGTGGTCGCC GGAGTTGCGG
GAAAAATTTG ACCGAGCGCT CCTGGCGCTG GGCCGGCTCG ACAGTGTATC CCTTCTGCTC
CCAGACACCT CGCTCTTTTT GTACATGTAC ATCCGAAAAG AGGCGGTCCT TTCGTCAATG
ATTGAAGGGA CCCAATCCTC CCTTACTGAC CTGCTCCTGT TCGAACTTGA CCAAGATCCA
GGCGTTCCTC TCGATGACGT TCGCGAAGTG AGCAATTATG TTGCCGCCCA GGAACATGGA
TTACGCCGCC TTCAGGAAGG ATTTCCTCTC TCGTTACGCC TATTGCGAGA AATTCACGCT
GTATTGCTGG CGCAGGGACG GGGAAGCCAA CAAACCCCTG GTGCCTTCCG ACGCAGCCAG
AACTGGATAG GCGGGACCAC CCCGAACAAT GCCGCCTTTG TGCCTCCGCC TGCTGAAAAA
ATGCTGGCGT GTATGAACGA TTTTGAACTT TTCCTCCACG ACCACCCCTG GCCCACACCG
GTTCTTCTCA AGGCCGCGCT GGCCCACGTC CAGTTTGAAA CTATCCACCC TTTTCTGGAC
GGCAACGGTC GACTGGGACG GCTTCTGATA CCCCTTCTTC TCTGCCAAGG CCAAGTACTC
CAGCAGCCAA TGCTCTATCT GAGCCTGTAT TTCAAAACAC ACCGTCAATA TTATTACGAT
CTCCTGAACA CAGTACGAAC AGAGGGCGAC TGGGAGAGGT GGCTCGATTT TTTTGCCGAA
GCCGTTATCG TCACCGCCAC ACAAGCGGTC GAGACAGCTG AGCAATTAGT CGGCTTGGCT
CAAAAAGACG AGAAAGCAAT CAAGCACTTG GGACGTTCTG CAGCAAGCAC CCTGCTCATC
CACCGTGCAC TCATGGAACA CCCCTTGACC ACCTCGCAAT GGCTCGTTCA AAAGACGGGT
CTTTCTCCAG CCACTGTCAA CAAGTCACTC AGGTCTCTTG AGCAAATTGG AATTGTCCGT
GAAACGACCG GGCACAAACG CAATCGCGTA TTCAGCTACC ATGAATATAT CTCGATCTTG
AACCGGGGGA CAGAAATTTT GCCTGAATGA
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| Protein sequence | MKRALQGHYV PISTTGITAQ AFVPAPLPPH PDIKWSPELR EKFDRALLAL GRLDSVSLLL
PDTSLFLYMY IRKEAVLSSM IEGTQSSLTD LLLFELDQDP GVPLDDVREV SNYVAAQEHG
LRRLQEGFPL SLRLLREIHA VLLAQGRGSQ QTPGAFRRSQ NWIGGTTPNN AAFVPPPAEK
MLACMNDFEL FLHDHPWPTP VLLKAALAHV QFETIHPFLD GNGRLGRLLI PLLLCQGQVL
QQPMLYLSLY FKTHRQYYYD LLNTVRTEGD WERWLDFFAE AVIVTATQAV ETAEQLVGLA
QKDEKAIKHL GRSAASTLLI HRALMEHPLT TSQWLVQKTG LSPATVNKSL RSLEQIGIVR
ETTGHKRNRV FSYHEYISIL NRGTEILPE
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