| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1496 |
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| Symbol | |
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| ID | 8419325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1733291 |
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| End bp | 1734628 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645038070 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_003198360 |
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| Protein GI | 258405618 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3666] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000517789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000823353 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAGAG GGTTTATTAA AGGGCATCGA GATCAACTCT ACCTGTTGCC ACCTTCAATT
GATGACTGGA TATCAAAAAA CCACAGTGTC AGGTTGATCG ATTCTTGTGT AGAAAATATT
GATTTATCAA TTTTTTATGA AAGCTACTCC CACGAGGGGA AGCCGCCTTA TGACCCTGCT
ATGATGATTC GTATTCTTAT TTATGCATAT AGCAAAGGAA TACGCTCTTC TCGGAAAATA
TCTGCTTTAT GCGAAGAAGA TATTGCTTTC CGGTGGCTTA CCGGAAATAT AATTCCTGAT
CATTCTGCTA TTTGCCGCTT CCGCGCTAAG CATAAAGAAA ATTTTAAGCA GCTTTTTCGA
GAAACAATCC GTTTGGCCGC TGAATCCGGT GCGTTAAAAA TAGGCAGTCT TTTTCTTGAT
GGAACTAAGG TGAAAGGCTC GGCTTCCTTG GAAGCCAATC GTAATCTCGA GCATATTAAG
CAAGACATTG AACGCATCGT GGACGAAGCT GAGGCAGTCG ATGCCAGTGA GGATAAGCAG
CTCGGCGAAG ATAACCGGGA CGATGTTTTG CCCCCTGAGC TTGCTGATCC CAAATCCCGG
TTGGAGCGAC TCAAGGCTGC CAAGGCCAGG CTGGAAGCTG AAAAAGAGGC TGCGGCGAAA
GAGTCTCGAG ATGACGACGA CTCAAATGGT CCTGGAGCTG GCACCGGTGA TGAAAAAACG
GCCACTGGCA ACAAAGAAAA AGCAAATATC ACCGATCCTG ACAGCAGAAT AATGAAAACA
CGGAACGGCT GGGTGCAAGG GTATAATTGC CAAGGAGTTT CAGACGAAAA TCAGTTTATA
GTCGCCAACG CAGTTACTCA AGACTGCAAT GACGCCCACC AACTCGAACC AATGCTTCAA
GCGGCTCAAG ACAACTTGTC CAAGATAGAG ACAGGCCAGA ACACCGAAAC CTTTTCGGCA
GATGCCGGTT ACTGGGCTGA GGGACTTGAT ATTTCAAAGA TCGAGAGCAA TGGCCCAGAG
GTGATTGTGG CTACCCGCAA AGGCTGGAAG CAGCGAAAAC AAAACCGTGA AAAGTCCCCA
CCTCGAGGGC GGATCCCCAA AGGGTTATCC CAGCGGGAGT TGATGGAACG AAAGCTACTG
ACCCAAAGAG GCCAGCGGAT CTATGCCAAG CGCGGACAAA CGATAGAAGC TATTTTCGGT
CAACTCAAGG AATGCCTTGG ATACAGGAAT TTTCTATTGC GTAGCCTCAA AAAAGTTCAG
GGTGAATGGG ACCTCCAATG TGCAGTGAGC AATATGCTCA AGCTGTTTCG GTTGTCAGGG
GCCACCACCA GTCAGTAG
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| Protein sequence | MARGFIKGHR DQLYLLPPSI DDWISKNHSV RLIDSCVENI DLSIFYESYS HEGKPPYDPA
MMIRILIYAY SKGIRSSRKI SALCEEDIAF RWLTGNIIPD HSAICRFRAK HKENFKQLFR
ETIRLAAESG ALKIGSLFLD GTKVKGSASL EANRNLEHIK QDIERIVDEA EAVDASEDKQ
LGEDNRDDVL PPELADPKSR LERLKAAKAR LEAEKEAAAK ESRDDDDSNG PGAGTGDEKT
ATGNKEKANI TDPDSRIMKT RNGWVQGYNC QGVSDENQFI VANAVTQDCN DAHQLEPMLQ
AAQDNLSKIE TGQNTETFSA DAGYWAEGLD ISKIESNGPE VIVATRKGWK QRKQNREKSP
PRGRIPKGLS QRELMERKLL TQRGQRIYAK RGQTIEAIFG QLKECLGYRN FLLRSLKKVQ
GEWDLQCAVS NMLKLFRLSG ATTSQ
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