| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1484 |
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| Symbol | |
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| ID | 8419313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1713878 |
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| End bp | 1715050 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645038058 |
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| Product | alanine racemase |
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| Protein accession | YP_003198348 |
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| Protein GI | 258405606 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.770988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000845672 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGTGCC GCCCAATATG GGCCGAGATC GATCTCGAGG CTATAGCTCA CAATATCAGC
GAAATTCGCA ACGCCGTCGG TTTTGGGCCC CAGATCATGG CTGTGGTCAA GGCCAATGCC
TACGGCCACG GCGCCGTTGA AGTGGCTCAG GCCAGCTTGC GAGCCGGGGC GTCCTGGCTT
GGAGTGGCCA GGGTCGCCGA AGGCATCGAA CTCCGCGAAG CCGGCATTGC GGCGCCGATC
CTCGTTCTGG GTACCTCGCC CCCGGAATGC GCTTCGGAAC TGCTGGCCTG GGATCTGCGC
CAGACGGTTT CCGGCCTGGA CGACGCCCGG GCGCTTGCCC GCCATGCTCG GAACCAGGAC
AAGACGTTGC AGGTGCATCT CAAAGTCGAC ACTGGCATGG GACGGCTCGG ACTTCTGGCC
GGGCCGGAAC TCGGCGGCGA CTTTGATGCG GCCGGGGAAG AAGTCGTGGC GATCCAGCAG
CTCTCCGGGA TCGCGCTCGA GGGCATTTTC ACCCACTTCG CCTGCGCCGA CAGCCGGGAC
AAATCCAGCG CCTCCCGGCA ATGGCAGCGC TTCACCGACT TCCTCGAGAC CCTCGATACC
CGCTCCCTGC CCAGAATTCC CGTCCGCCAC GCTGCCAATA GCGCCTCCAT CATCGATCTG
CCGCGCACCC ATCTCGACCT GGTCCGAGCC GGGATCATGC TCTACGGCCT GTATCCGTCA
GCTGAAGTCG ACCATGCCGG TGTCCGTCTC AAGCCGGCCA TGACGGTCAA GGCCCGCATC
AGCCAGGTCA AAGATGTGCC CGCGGGGTTC TGCGTCAGCT ACGGTTCTAC CTATACGACC
CCTGCGCCAA CGCGGATTGC CACGGTGCCG GTGGGCTATG CCGACGGCTA CACCCGTTTG
CTCTCCTCGC AGGCGCACAT GGTGGTCCAC GGACAGCGGG TGCCGGTGGT GGGCCGAGTC
TGTATGGACC AGACCCTGCT TGATGTCGGC GGCCTCCCGG AAGTCGCTGC AGGAGACGAG
GTCGTCCTTC TCGGCAGCCA GGGTGAGGCG TGCGTCAGCG CGGACGAACT CGCCGAACTG
ACGGGGACGA TCAACTACGA AATCGTTTCC ACGCTCATGG CCCGTGTCCC GAGAATTTTT
CTGCCTGCCG TAGCGGGGCG TCACAGAGAC TGA
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| Protein sequence | MSCRPIWAEI DLEAIAHNIS EIRNAVGFGP QIMAVVKANA YGHGAVEVAQ ASLRAGASWL
GVARVAEGIE LREAGIAAPI LVLGTSPPEC ASELLAWDLR QTVSGLDDAR ALARHARNQD
KTLQVHLKVD TGMGRLGLLA GPELGGDFDA AGEEVVAIQQ LSGIALEGIF THFACADSRD
KSSASRQWQR FTDFLETLDT RSLPRIPVRH AANSASIIDL PRTHLDLVRA GIMLYGLYPS
AEVDHAGVRL KPAMTVKARI SQVKDVPAGF CVSYGSTYTT PAPTRIATVP VGYADGYTRL
LSSQAHMVVH GQRVPVVGRV CMDQTLLDVG GLPEVAAGDE VVLLGSQGEA CVSADELAEL
TGTINYEIVS TLMARVPRIF LPAVAGRHRD
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