Gene Dret_1437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1437 
Symbol 
ID8419266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1670134 
End bp1670928 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content61% 
IMG OID645038012 
Producthypothetical protein 
Protein accessionYP_003198302 
Protein GI258405560 
COG category[R] General function prediction only 
COG ID[COG0390] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID[TIGR00245] conserved hypothetical protein TIGR00245 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.318799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0549134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC TTATCGACAT CGGCCCCTTC GAACTCGGCC TGGCTGCCCT GCTTATCCTC 
TTGAATATGG GGATCTCCAT CTGGCTTCGC CTGGGGCTGG CCCGCAATCT CGCCCTGGCC
GCGTTGCGCA TGACCGTTCA GCTCCTGCTG GTGGGGTTTA TTCTCGAGTC CATTTTCGCC
TTGAACCACC CGGTGCCGGT GCTGGGCATG GGCCTGCTCA TGGCCTCCCT GGCCGGGGTG
TCGGCCGTGC GACGGACAAA GCGCCGATTC GCCGGCATTT ATTTCAGCAG TCTCTTTTCA
GTGCTCGCCG CCTCGTCCCT GGTCACCGGG GCTGCGGTCA CCGGCATTCT CCGTGTTGAA
CCGTGGTTTA CGGCCCAATA CCTTATCCCG CTTTTGGGCA TGGTCCTGGG GAACGCCCTG
AATGGGATTT CCCTGGCCCT GGACCGTTTT ATGGAAGGGG TCCTGACCCA GCGCGACCGG
ATCGAAACAA GCCTCACCCT GGGGGCCAGC CGCTGGGAAG CGGCCCATTT TCTGGTCCGA
GACAGTTTGC GCACCGGGAT GATTCCGGTA ATCAACAGTA TGATGGTCAT GGGCCTGGTC
AGTCTGCCGG GAATGATGAC CGGACAGATC CTGGCCGGAG CTGCCCCGGC CGATGCGGTG
CGCTATCAGA TCGTCATCAC CTTCATGATC GCTGCTTCCA GTGCCCTGGG CGCCTTTGGG
GTGACGGTGC TTGCCTTTTT CCGCCTGTTT TCCGCGAGCC ATCAACTTCG GGCCACCGAG
CTCAAAGACG CCTGA
 
Protein sequence
MTTLIDIGPF ELGLAALLIL LNMGISIWLR LGLARNLALA ALRMTVQLLL VGFILESIFA 
LNHPVPVLGM GLLMASLAGV SAVRRTKRRF AGIYFSSLFS VLAASSLVTG AAVTGILRVE
PWFTAQYLIP LLGMVLGNAL NGISLALDRF MEGVLTQRDR IETSLTLGAS RWEAAHFLVR
DSLRTGMIPV INSMMVMGLV SLPGMMTGQI LAGAAPADAV RYQIVITFMI AASSALGAFG
VTVLAFFRLF SASHQLRATE LKDA