| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1361 |
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| Symbol | |
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| ID | 8419190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1588922 |
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| End bp | 1590472 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037937 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003198227 |
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| Protein GI | 258405485 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000166548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.279813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGGG TCCTATGTAT TTTGAGTGTG CTGATTTTCA GCATACTCCT GGTCGGGAGT
GTTCAGGCGA AGACGTTGCG CTTAGCCATG GACGCAGATC CCTATTCCTT GGATCCCCAT
GTGCAGCTGT CTGGCGGCAT GCTCCAGTAT TCCCATCTGG TCTTTGACCC GTTGGTGCGC
TGGACCAAGG ATATGGAATT CGAACCCCGC CTGGCCACGA GCTGGGAACG TATCGATGCG
ACCACCATGC GCTTCCACCT GCGCGAAGGG GTCACCTTCC ATTCCGGCAA CCCGTTTACG
GCCAAGGATG TTGTCTGGAC ATTGAAACGC TTAAAGAAAA GCCCGGATTT CAAAGGCTTG
TTTGAACCAT TCGAGGGAGC CAAAGCGGTG GACCAATACA CCGTGGATGT GGTGACCAAA
AAACCTTATC CTTTGCTGTT GAACATGGCG ACCTATATTT TCCCCATGGA CAGCGAGTTC
TACACCGGTG AGGACAAGAA CGGCAATCCG AAGGACGCGA TCAAGAAGAT CGGCTACACC
TTTGCCAACA CCCACGAGTC CGGTACCGGG AAGTACAAGG TTGTTGAGCG GCAGCAGGGC
GTCAAGGTCG TCTACGAGGC CTACGACAAC TATTGGGACG AGGACAGCGG CAATGTCGAC
AAGATTATCC TCACGCCGAT CAAAAAGGAC TCCACCCGCG TGGCGGCCCT TCTTTCCGGC
GACGTGGATT TCATCATGCC TGTGCCGCCG CAGGATTACG ACCGGCTGGA AAAACGGGAT
GGCATCGATC TGGTGACCAT GTCCGGTAGC CGGGTGATCA CGTTCCAGCT GAACCAGGAA
CGCCGCCCTG AATTTGCGAA CAAGAAAGTG CGCCAGGCCA TTGTCCATGC CGTGAACAAC
GTCGGCATTG CCCAGAAGAT CATGGAAGGC CGGGCCACTC CGGCCGCGCA GCAGGCCCCG
GAAGGGTTTG CCAGCTACCA GCCTGAGCTG ACGCCGCGCC ACGATGTGGC CAAGGCCAAG
GAACTCATGA AGGAAGCCGG CTATCCCGAC GGCTTTGAGT GCTCCATGAT TGCCCCGAAC
AATCGGTACG TCAAAGACGA AAAGATCGCT CAGGCTGTGG CGGCCATGCT CTCCAAGATC
GGGATCAAGG CCAATCTGAC CACCATGCCC AAGGCCCAGT ACTGGAACAA GTTCGACGCC
CAGGTGGCCG ACATTCAAAT GATCGGCTGG CACCCGGACA CCGAGGATTC GGCCAATTAC
ACCGAATTCC TGCTCATGTG CCCGAACAAG GAAACCGGAT ACGGCCAATA CAACAGCGGC
AACTACTGCA ACAAGGAAGT CGATCAGTTC ATTCTGGACG CCCAGACCGA GACCGATCAG
GAGAAGCGGA CCGCCATGCT GAAGAAGGTG GAGCGGATCC TCTATGAAGA TGCTGCGTTC
GTGCCCTTGC ACTGGCAGCA CCTCTCCTGG GCCGGCAAGG ACAATCTGAA GATCGAGCCC
ATCGTGAATA AGCAGAATTT CCCATATTTC GGGGACCTGG TTATCCAGTA A
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| Protein sequence | MKRVLCILSV LIFSILLVGS VQAKTLRLAM DADPYSLDPH VQLSGGMLQY SHLVFDPLVR
WTKDMEFEPR LATSWERIDA TTMRFHLREG VTFHSGNPFT AKDVVWTLKR LKKSPDFKGL
FEPFEGAKAV DQYTVDVVTK KPYPLLLNMA TYIFPMDSEF YTGEDKNGNP KDAIKKIGYT
FANTHESGTG KYKVVERQQG VKVVYEAYDN YWDEDSGNVD KIILTPIKKD STRVAALLSG
DVDFIMPVPP QDYDRLEKRD GIDLVTMSGS RVITFQLNQE RRPEFANKKV RQAIVHAVNN
VGIAQKIMEG RATPAAQQAP EGFASYQPEL TPRHDVAKAK ELMKEAGYPD GFECSMIAPN
NRYVKDEKIA QAVAAMLSKI GIKANLTTMP KAQYWNKFDA QVADIQMIGW HPDTEDSANY
TEFLLMCPNK ETGYGQYNSG NYCNKEVDQF ILDAQTETDQ EKRTAMLKKV ERILYEDAAF
VPLHWQHLSW AGKDNLKIEP IVNKQNFPYF GDLVIQ
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