Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1328 |
Symbol | |
ID | 8419157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1553561 |
End bp | 1554322 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645037904 |
Product | Peptidylprolyl isomerase |
Protein accession | YP_003198194 |
Protein GI | 258405452 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.635947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.391085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGTT GGCTCATGCT TTGTCTAGTT GGGGGGGTGG TCTTTCTGGC TGCCTGTCAG CAATCGGCTC AGGAAACACC CCAGGAAACG ACTGAATCCG CGGCGGTGAC GCTGGATACT GATCAGGACA AGGTCAGTTA CGGTTTGGGG ATGGACATAG GCAATAAATT GAAATCCCAA GAATTCGACC TTGACCCCGA CTTGGCCGCC CAGGGACTCA AAGATGCCTT ATCCGGCAAC GAGACCCTGA TGACGCCGGA AGAGGTCCAA CAAAGCCTCC AGGCCCTGCA GCAGCGATTG CTCCAGGAGC AGCAAAAGAA ACAACAGGAA ACTGCCGCCA AAAATGCAGA GGCCGGCCGC GCCTTTCTGG AGGCCAACAA GGCCAAGGAA GGTGTGCAGA CCACGGAGAG CGGACTGCAG TACAAAGTCG TGGAAAAAGG TGACGGCCCC CAGCCGGACG CCGACGACGT GGTCACGGTG CACTATACGG GGAAATTGGT TAATGGCACG GTCTTTGACA GCTCCCGCGA ACGGGGCAAG CCGGCCACTT TTCCGGTCAA TGGTGTCATT CCGGGGTGGA CTGAGGCCCT GCAAATGATG CACGAGGGCG CTCAATGGCA GGTTGTTCTG CCGGCCGATC TTGCTTATGG CGCCCGTCAG GCTGGTCCGC AAATCGGCCC CAATTCGACC CTGGTCTTTG ATGTCGAATT ATTAGAGGTC CAGAAAAAGG ACACCGAGGC TAACGCAACA GCGCAGCAAT AA
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Protein sequence | MQRWLMLCLV GGVVFLAACQ QSAQETPQET TESAAVTLDT DQDKVSYGLG MDIGNKLKSQ EFDLDPDLAA QGLKDALSGN ETLMTPEEVQ QSLQALQQRL LQEQQKKQQE TAAKNAEAGR AFLEANKAKE GVQTTESGLQ YKVVEKGDGP QPDADDVVTV HYTGKLVNGT VFDSSRERGK PATFPVNGVI PGWTEALQMM HEGAQWQVVL PADLAYGARQ AGPQIGPNST LVFDVELLEV QKKDTEANAT AQQ
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